FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1637771_s_at:

>probe:Drosophila_2:1637771_s_at:135:199; Interrogation_Position=1196; Antisense; AACGTTTGATAGTTCTGGCACCTCG
>probe:Drosophila_2:1637771_s_at:293:153; Interrogation_Position=1245; Antisense; ACATGCATCGTTCGCGGCATTTTCT
>probe:Drosophila_2:1637771_s_at:168:273; Interrogation_Position=1262; Antisense; CATTTTCTGCCCGAGTAGCGTGACC
>probe:Drosophila_2:1637771_s_at:273:307; Interrogation_Position=1305; Antisense; CCTCCATCCCAGCTTATATTAATTT
>probe:Drosophila_2:1637771_s_at:351:231; Interrogation_Position=1397; Antisense; AATGTATTAGCAGCCATATCCCCGA
>probe:Drosophila_2:1637771_s_at:698:615; Interrogation_Position=1444; Antisense; TGCACTCTGTAATCTACCCACATTG
>probe:Drosophila_2:1637771_s_at:148:259; Interrogation_Position=1462; Antisense; CACATTGCCCATGCATAGGTCGTTA
>probe:Drosophila_2:1637771_s_at:520:201; Interrogation_Position=1491; Antisense; AACCAGTTCATGTACTTGGCTAGGA
>probe:Drosophila_2:1637771_s_at:490:339; Interrogation_Position=1509; Antisense; GCTAGGATAGTCCATCTGTGGCCAA
>probe:Drosophila_2:1637771_s_at:588:179; Interrogation_Position=1532; Antisense; AAAAATCTCGCAAGTGGCCCGATCG
>probe:Drosophila_2:1637771_s_at:191:581; Interrogation_Position=1546; Antisense; TGGCCCGATCGCAGAACACATTTAC
>probe:Drosophila_2:1637771_s_at:369:151; Interrogation_Position=1563; Antisense; ACATTTACCTCTAACTGTGCAAGTA
>probe:Drosophila_2:1637771_s_at:589:279; Interrogation_Position=1610; Antisense; CTCGTCCGACTATCACACGATTTAA
>probe:Drosophila_2:1637771_s_at:296:209; Interrogation_Position=1743; Antisense; AAGAAGTCTGTAGTCGAACGAACCA

Paste this into a BLAST search page for me
AACGTTTGATAGTTCTGGCACCTCGACATGCATCGTTCGCGGCATTTTCTCATTTTCTGCCCGAGTAGCGTGACCCCTCCATCCCAGCTTATATTAATTTAATGTATTAGCAGCCATATCCCCGATGCACTCTGTAATCTACCCACATTGCACATTGCCCATGCATAGGTCGTTAAACCAGTTCATGTACTTGGCTAGGAGCTAGGATAGTCCATCTGTGGCCAAAAAAATCTCGCAAGTGGCCCGATCGTGGCCCGATCGCAGAACACATTTACACATTTACCTCTAACTGTGCAAGTACTCGTCCGACTATCACACGATTTAAAAGAAGTCTGTAGTCGAACGAACCA

Full Affymetrix probeset data:

Annotations for 1637771_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720