FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1637780_a_at:

>probe:Drosophila_2:1637780_a_at:279:571; Interrogation_Position=3342; Antisense; GGCTTCCAAGCAGTCGAGTTCGATA
>probe:Drosophila_2:1637780_a_at:326:359; Interrogation_Position=3367; Antisense; GCAACGCACTGTTCGGAGAGGTCCT
>probe:Drosophila_2:1637780_a_at:173:101; Interrogation_Position=3383; Antisense; AGAGGTCCTTGAAGCCATCTACAGC
>probe:Drosophila_2:1637780_a_at:322:307; Interrogation_Position=3396; Antisense; GCCATCTACAGCAAGTTCCGGGATT
>probe:Drosophila_2:1637780_a_at:96:465; Interrogation_Position=3417; Antisense; GATTGGCCGGACTGCGTAATCAACT
>probe:Drosophila_2:1637780_a_at:415:615; Interrogation_Position=3463; Antisense; TGAATCTGGCGGTCATGGCTCTGCA
>probe:Drosophila_2:1637780_a_at:163:507; Interrogation_Position=3515; Antisense; GTGCGATTCAGAGTGTGCCAGCTTC
>probe:Drosophila_2:1637780_a_at:302:341; Interrogation_Position=3535; Antisense; GCTTCAATGCTCTGGACGTACTGAT
>probe:Drosophila_2:1637780_a_at:448:445; Interrogation_Position=3557; Antisense; GATGAAGAACATCCGCCTAGTGCCC
>probe:Drosophila_2:1637780_a_at:644:307; Interrogation_Position=3580; Antisense; CCAGTTTTCGTTCCGCCAATATGTA
>probe:Drosophila_2:1637780_a_at:582:311; Interrogation_Position=3594; Antisense; GCCAATATGTATCCGACTGCTCTAC
>probe:Drosophila_2:1637780_a_at:420:337; Interrogation_Position=3612; Antisense; GCTCTACAACTCATGCAATCTGGTC
>probe:Drosophila_2:1637780_a_at:652:421; Interrogation_Position=3785; Antisense; GAGAAGTTCCGAGCCGGCATTGGAT
>probe:Drosophila_2:1637780_a_at:75:473; Interrogation_Position=3870; Antisense; GTTAATTCTGTGTTTTCGACTTCAA

Paste this into a BLAST search page for me
GGCTTCCAAGCAGTCGAGTTCGATAGCAACGCACTGTTCGGAGAGGTCCTAGAGGTCCTTGAAGCCATCTACAGCGCCATCTACAGCAAGTTCCGGGATTGATTGGCCGGACTGCGTAATCAACTTGAATCTGGCGGTCATGGCTCTGCAGTGCGATTCAGAGTGTGCCAGCTTCGCTTCAATGCTCTGGACGTACTGATGATGAAGAACATCCGCCTAGTGCCCCCAGTTTTCGTTCCGCCAATATGTAGCCAATATGTATCCGACTGCTCTACGCTCTACAACTCATGCAATCTGGTCGAGAAGTTCCGAGCCGGCATTGGATGTTAATTCTGTGTTTTCGACTTCAA

Full Affymetrix probeset data:

Annotations for 1637780_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720