Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

 University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1637995_at:

>probe:Drosophila_2:1637995_at:24:109; Interrogation_Position=106; Antisense; ACGAACTCGAATCCCCGGTGCAAGG
>probe:Drosophila_2:1637995_at:592:685; Interrogation_Position=142; Antisense; TATCAATGCGTTTGCGACTACACCT
>probe:Drosophila_2:1637995_at:22:543; Interrogation_Position=15; Antisense; GGTTGCCAAGATTCTGCTGAGCCTG
>probe:Drosophila_2:1637995_at:286:147; Interrogation_Position=158; Antisense; ACTACACCTGCTCCGAGTGGGACAA
>probe:Drosophila_2:1637995_at:480:593; Interrogation_Position=175; Antisense; TGGGACAAGCCCTGCAACTGGGTAC
>probe:Drosophila_2:1637995_at:529:195; Interrogation_Position=190; Antisense; AACTGGGTACTTACATGTCCTGAAG
>probe:Drosophila_2:1637995_at:468:189; Interrogation_Position=253; Antisense; AAGCTAAATTTGTTCAGATTGCCCA
>probe:Drosophila_2:1637995_at:151:95; Interrogation_Position=268; Antisense; AGATTGCCCAATCGAAACCGCCTGG
>probe:Drosophila_2:1637995_at:599:317; Interrogation_Position=287; Antisense; GCCTGGAGTGCCTGGACATCAATGT
>probe:Drosophila_2:1637995_at:373:33; Interrogation_Position=304; Antisense; ATCAATGTCTACACCATTACGCGTC
>probe:Drosophila_2:1637995_at:272:15; Interrogation_Position=319; Antisense; ATTACGCGTCCGAATTGCTGCGACT
>probe:Drosophila_2:1637995_at:535:363; Interrogation_Position=330; Antisense; GAATTGCTGCGACTTGTTCTGCAAG
>probe:Drosophila_2:1637995_at:694:333; Interrogation_Position=49; Antisense; GCTGTTGTCACCGATCTGGTCTCAG
>probe:Drosophila_2:1637995_at:27:183; Interrogation_Position=86; Antisense; AAAACCTGTGCCCAGTGGTCACGAA

Paste this into a BLAST search page for me
ACGAACTCGAATCCCCGGTGCAAGGTATCAATGCGTTTGCGACTACACCTGGTTGCCAAGATTCTGCTGAGCCTGACTACACCTGCTCCGAGTGGGACAATGGGACAAGCCCTGCAACTGGGTACAACTGGGTACTTACATGTCCTGAAGAAGCTAAATTTGTTCAGATTGCCCAAGATTGCCCAATCGAAACCGCCTGGGCCTGGAGTGCCTGGACATCAATGTATCAATGTCTACACCATTACGCGTCATTACGCGTCCGAATTGCTGCGACTGAATTGCTGCGACTTGTTCTGCAAGGCTGTTGTCACCGATCTGGTCTCAGAAAACCTGTGCCCAGTGGTCACGAA

Full Affymetrix probeset data:

Annotations for 1637995_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime