FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638008_s_at:

>probe:Drosophila_2:1638008_s_at:35:393; Interrogation_Position=1221; Antisense; GAAAGACCTACACGAGCATAGCTCT
>probe:Drosophila_2:1638008_s_at:366:315; Interrogation_Position=1256; Antisense; GCCTCTATAATGCTTTCCCTAGTTA
>probe:Drosophila_2:1638008_s_at:478:583; Interrogation_Position=1305; Antisense; TGGTCCTTGTTTTGGTAACCCTCAG
>probe:Drosophila_2:1638008_s_at:435:305; Interrogation_Position=1324; Antisense; CCTCAGTGTGGGTGTTAGCAGCGCA
>probe:Drosophila_2:1638008_s_at:565:465; Interrogation_Position=1375; Antisense; GATTGATTTATCACCAAACCACGCC
>probe:Drosophila_2:1638008_s_at:491:577; Interrogation_Position=1412; Antisense; GGCCTCATGAGCAGCTTCACCAATT
>probe:Drosophila_2:1638008_s_at:162:711; Interrogation_Position=1427; Antisense; TTCACCAATTTGATGGCCCTGCTGA
>probe:Drosophila_2:1638008_s_at:602:143; Interrogation_Position=1451; Antisense; ACTCCTCTTGTGGTGGGCGTTTTAG
>probe:Drosophila_2:1638008_s_at:88:697; Interrogation_Position=1471; Antisense; TTTAGTAACGGACCCCAGTCAGCGG
>probe:Drosophila_2:1638008_s_at:492:265; Interrogation_Position=1505; Antisense; CAGATAGTTTTTAGCCTGGCTGCCG
>probe:Drosophila_2:1638008_s_at:594:335; Interrogation_Position=1523; Antisense; GCTGCCGGAGTTCTGTTTACTGGTA
>probe:Drosophila_2:1638008_s_at:44:529; Interrogation_Position=1568; Antisense; GGGACTGCTGTGACACAACCATGGA
>probe:Drosophila_2:1638008_s_at:383:549; Interrogation_Position=1627; Antisense; GGAGGAGAAGCCTTTTCACCGCGCT
>probe:Drosophila_2:1638008_s_at:308:701; Interrogation_Position=1639; Antisense; TTTTCACCGCGCTAAACTCGAGATA

Paste this into a BLAST search page for me
GAAAGACCTACACGAGCATAGCTCTGCCTCTATAATGCTTTCCCTAGTTATGGTCCTTGTTTTGGTAACCCTCAGCCTCAGTGTGGGTGTTAGCAGCGCAGATTGATTTATCACCAAACCACGCCGGCCTCATGAGCAGCTTCACCAATTTTCACCAATTTGATGGCCCTGCTGAACTCCTCTTGTGGTGGGCGTTTTAGTTTAGTAACGGACCCCAGTCAGCGGCAGATAGTTTTTAGCCTGGCTGCCGGCTGCCGGAGTTCTGTTTACTGGTAGGGACTGCTGTGACACAACCATGGAGGAGGAGAAGCCTTTTCACCGCGCTTTTTCACCGCGCTAAACTCGAGATA

Full Affymetrix probeset data:

Annotations for 1638008_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720