FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638037_a_at:

>probe:Drosophila_2:1638037_a_at:322:365; Interrogation_Position=2909; Antisense; GAATATTCCGCATCGGCCATCATGT
>probe:Drosophila_2:1638037_a_at:510:579; Interrogation_Position=2923; Antisense; GGCCATCATGTCAACGGCGGCAAGG
>probe:Drosophila_2:1638037_a_at:356:411; Interrogation_Position=2980; Antisense; GACGCTGGGACTCCTGGGAATCCTT
>probe:Drosophila_2:1638037_a_at:566:367; Interrogation_Position=2997; Antisense; GAATCCTTGGACTCCTATGGGCGAT
>probe:Drosophila_2:1638037_a_at:154:409; Interrogation_Position=3052; Antisense; GACGTGACTCGCCTATTGAACGAAC
>probe:Drosophila_2:1638037_a_at:147:573; Interrogation_Position=3087; Antisense; GGCGTCCGACTTCCAATTATTTGTA
>probe:Drosophila_2:1638037_a_at:569:19; Interrogation_Position=3105; Antisense; ATTTGTAAGCTTTTGCGCCATCTGC
>probe:Drosophila_2:1638037_a_at:354:323; Interrogation_Position=3119; Antisense; GCGCCATCTGCAGTTACGTAATTTA
>probe:Drosophila_2:1638037_a_at:275:69; Interrogation_Position=3161; Antisense; AGGCGGCCTTGTAAATAGCGGAGAT
>probe:Drosophila_2:1638037_a_at:561:113; Interrogation_Position=3225; Antisense; AGCAGGAGCCCAGTCGAAACCGAAT
>probe:Drosophila_2:1638037_a_at:39:199; Interrogation_Position=3272; Antisense; AACGTTGCCATAACTCTCATGTCTG
>probe:Drosophila_2:1638037_a_at:366:647; Interrogation_Position=3288; Antisense; TCATGTCTGCGTGTCTCACATTATC
>probe:Drosophila_2:1638037_a_at:289:705; Interrogation_Position=3308; Antisense; TTATCCCCATACCATACTGCATTAA
>probe:Drosophila_2:1638037_a_at:241:207; Interrogation_Position=3354; Antisense; AAGCAGACCCCATTTCAAGTTGTGA

Paste this into a BLAST search page for me
GAATATTCCGCATCGGCCATCATGTGGCCATCATGTCAACGGCGGCAAGGGACGCTGGGACTCCTGGGAATCCTTGAATCCTTGGACTCCTATGGGCGATGACGTGACTCGCCTATTGAACGAACGGCGTCCGACTTCCAATTATTTGTAATTTGTAAGCTTTTGCGCCATCTGCGCGCCATCTGCAGTTACGTAATTTAAGGCGGCCTTGTAAATAGCGGAGATAGCAGGAGCCCAGTCGAAACCGAATAACGTTGCCATAACTCTCATGTCTGTCATGTCTGCGTGTCTCACATTATCTTATCCCCATACCATACTGCATTAAAAGCAGACCCCATTTCAAGTTGTGA

Full Affymetrix probeset data:

Annotations for 1638037_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720