FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638090_at:

>probe:Drosophila_2:1638090_at:709:553; Interrogation_Position=430; Antisense; GGAGCGACTGCGATTATTCTGGACT
>probe:Drosophila_2:1638090_at:328:405; Interrogation_Position=451; Antisense; GACTCGGTTCCAGGATTTGTGGCTG
>probe:Drosophila_2:1638090_at:604:331; Interrogation_Position=506; Antisense; GCGGCAATCAATGGACACTCACCTG
>probe:Drosophila_2:1638090_at:460:359; Interrogation_Position=548; Antisense; GCAACCGCCTGTGAGTATCGCGTGA
>probe:Drosophila_2:1638090_at:647:681; Interrogation_Position=563; Antisense; TATCGCGTGATGTTGCCGAATCTCT
>probe:Drosophila_2:1638090_at:495:365; Interrogation_Position=580; Antisense; GAATCTCTTTATCGGTATACATGCC
>probe:Drosophila_2:1638090_at:12:483; Interrogation_Position=594; Antisense; GTATACATGCCACCCGGTTTAGCTT
>probe:Drosophila_2:1638090_at:586:445; Interrogation_Position=637; Antisense; GATGAACTCGTACCAGAGCGTTCTA
>probe:Drosophila_2:1638090_at:81:471; Interrogation_Position=656; Antisense; GTTCTACCCCGCAGAATTGTGGAGC
>probe:Drosophila_2:1638090_at:276:365; Interrogation_Position=688; Antisense; GAATCAAGGTAAGCTCTTCGCCAGC
>probe:Drosophila_2:1638090_at:494:315; Interrogation_Position=785; Antisense; GCCTTCATAGCCACCTTTGACAAGA
>probe:Drosophila_2:1638090_at:693:79; Interrogation_Position=824; Antisense; AGGTGCCTAACCAAGCGAATGTGTC
>probe:Drosophila_2:1638090_at:478:549; Interrogation_Position=898; Antisense; GGAGTGCGTCGACTATGTCACTACT
>probe:Drosophila_2:1638090_at:573:597; Interrogation_Position=944; Antisense; TGTGCCCACTTGGAGGGTCTCAAGA

Paste this into a BLAST search page for me
GGAGCGACTGCGATTATTCTGGACTGACTCGGTTCCAGGATTTGTGGCTGGCGGCAATCAATGGACACTCACCTGGCAACCGCCTGTGAGTATCGCGTGATATCGCGTGATGTTGCCGAATCTCTGAATCTCTTTATCGGTATACATGCCGTATACATGCCACCCGGTTTAGCTTGATGAACTCGTACCAGAGCGTTCTAGTTCTACCCCGCAGAATTGTGGAGCGAATCAAGGTAAGCTCTTCGCCAGCGCCTTCATAGCCACCTTTGACAAGAAGGTGCCTAACCAAGCGAATGTGTCGGAGTGCGTCGACTATGTCACTACTTGTGCCCACTTGGAGGGTCTCAAGA

Full Affymetrix probeset data:

Annotations for 1638090_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720