Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638199_s_at:

>probe:Drosophila_2:1638199_s_at:157:597; Interrogation_Position=6703; Antisense; TGTGTGTCTATTGCATTATTTGTAC
>probe:Drosophila_2:1638199_s_at:657:277; Interrogation_Position=6710; Antisense; CTATTGCATTATTTGTACACGTACA
>probe:Drosophila_2:1638199_s_at:379:181; Interrogation_Position=6882; Antisense; AAAAGCAAATTTTATGCCACGCCCA
>probe:Drosophila_2:1638199_s_at:451:243; Interrogation_Position=6889; Antisense; AATTTTATGCCACGCCCATGCCACG
>probe:Drosophila_2:1638199_s_at:606:145; Interrogation_Position=7033; Antisense; ACTCACATCCACGTTGCGGATTCTG
>probe:Drosophila_2:1638199_s_at:677:259; Interrogation_Position=7042; Antisense; CACGTTGCGGATTCTGGATGCCGGA
>probe:Drosophila_2:1638199_s_at:456:545; Interrogation_Position=7057; Antisense; GGATGCCGGATACGCCAAGTCAGAT
>probe:Drosophila_2:1638199_s_at:363:249; Interrogation_Position=7072; Antisense; CAAGTCAGATGGGTGACCACCGCTC
>probe:Drosophila_2:1638199_s_at:192:99; Interrogation_Position=7078; Antisense; AGATGGGTGACCACCGCTCCTGGGC
>probe:Drosophila_2:1638199_s_at:139:631; Interrogation_Position=7095; Antisense; TCCTGGGCTCCATCCGATGGGCTGG
>probe:Drosophila_2:1638199_s_at:210:487; Interrogation_Position=7119; Antisense; GTAGCGGTGTGGAGCCGCCACAACC
>probe:Drosophila_2:1638199_s_at:249:415; Interrogation_Position=7130; Antisense; GAGCCGCCACAACCGAAAGACGAGG
>probe:Drosophila_2:1638199_s_at:412:491; Interrogation_Position=7190; Antisense; GTAATAAATTTGTGGGCATTTTCCA
>probe:Drosophila_2:1638199_s_at:398:517; Interrogation_Position=7201; Antisense; GTGGGCATTTTCCAAATATTTGTGA

Paste this into a BLAST search page for me
TGTGTGTCTATTGCATTATTTGTACCTATTGCATTATTTGTACACGTACAAAAAGCAAATTTTATGCCACGCCCAAATTTTATGCCACGCCCATGCCACGACTCACATCCACGTTGCGGATTCTGCACGTTGCGGATTCTGGATGCCGGAGGATGCCGGATACGCCAAGTCAGATCAAGTCAGATGGGTGACCACCGCTCAGATGGGTGACCACCGCTCCTGGGCTCCTGGGCTCCATCCGATGGGCTGGGTAGCGGTGTGGAGCCGCCACAACCGAGCCGCCACAACCGAAAGACGAGGGTAATAAATTTGTGGGCATTTTCCAGTGGGCATTTTCCAAATATTTGTGA

Full Affymetrix probeset data:

Annotations for 1638199_s_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime