FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638278_s_at:

>probe:Drosophila_2:1638278_s_at:145:413; Interrogation_Position=3026; Antisense; GACCGCTTTATCCTGCTGAGCAACA
>probe:Drosophila_2:1638278_s_at:402:71; Interrogation_Position=3051; Antisense; AGGCTATATATGTCCTCGACGGCAA
>probe:Drosophila_2:1638278_s_at:210:677; Interrogation_Position=3105; Antisense; TAGACAAGATCGACTTCACGCTGAC
>probe:Drosophila_2:1638278_s_at:725:409; Interrogation_Position=3140; Antisense; GACGACCTGATGGTCATCCGCATAC
>probe:Drosophila_2:1638278_s_at:59:347; Interrogation_Position=3159; Antisense; GCATACCGCTCGACCTGAAAAAGGA
>probe:Drosophila_2:1638278_s_at:590:401; Interrogation_Position=3191; Antisense; GACTTGATTCTGATCATTCCGCGCA
>probe:Drosophila_2:1638278_s_at:546:9; Interrogation_Position=3206; Antisense; ATTCCGCGCATAATCGAGTTCAGCA
>probe:Drosophila_2:1638278_s_at:525:429; Interrogation_Position=3221; Antisense; GAGTTCAGCACGTATATCATTGACA
>probe:Drosophila_2:1638278_s_at:472:37; Interrogation_Position=3236; Antisense; ATCATTGACACCGTGGGAACTGCCT
>probe:Drosophila_2:1638278_s_at:644:629; Interrogation_Position=3260; Antisense; TCCATCGTCTCCATTGTGGACAGAA
>probe:Drosophila_2:1638278_s_at:118:223; Interrogation_Position=3314; Antisense; AAGGGCGGCGTCATCGACATCCAAA
>probe:Drosophila_2:1638278_s_at:541:31; Interrogation_Position=3366; Antisense; ATAAGGGCCATCTAGTTATCATTGG
>probe:Drosophila_2:1638278_s_at:698:79; Interrogation_Position=3428; Antisense; AGTGGCTTTAAATCAAACGACCTTG
>probe:Drosophila_2:1638278_s_at:68:483; Interrogation_Position=3488; Antisense; GTATTTTTGTTACTGCAGCACCTGA

Paste this into a BLAST search page for me
GACCGCTTTATCCTGCTGAGCAACAAGGCTATATATGTCCTCGACGGCAATAGACAAGATCGACTTCACGCTGACGACGACCTGATGGTCATCCGCATACGCATACCGCTCGACCTGAAAAAGGAGACTTGATTCTGATCATTCCGCGCAATTCCGCGCATAATCGAGTTCAGCAGAGTTCAGCACGTATATCATTGACAATCATTGACACCGTGGGAACTGCCTTCCATCGTCTCCATTGTGGACAGAAAAGGGCGGCGTCATCGACATCCAAAATAAGGGCCATCTAGTTATCATTGGAGTGGCTTTAAATCAAACGACCTTGGTATTTTTGTTACTGCAGCACCTGA

Full Affymetrix probeset data:

Annotations for 1638278_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720