FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638287_a_at:

>probe:Drosophila_2:1638287_a_at:298:707; Interrogation_Position=2094; Antisense; TTACGCCCAATATCTTTGTGCCCTA
>probe:Drosophila_2:1638287_a_at:581:457; Interrogation_Position=2173; Antisense; GATATCCACGGGAAATATTGCCCAG
>probe:Drosophila_2:1638287_a_at:264:687; Interrogation_Position=2188; Antisense; TATTGCCCAGGGACCGGTGATAGCC
>probe:Drosophila_2:1638287_a_at:250:411; Interrogation_Position=2214; Antisense; GACGCCATGTGGATCACCTGAATGT
>probe:Drosophila_2:1638287_a_at:96:455; Interrogation_Position=2225; Antisense; GATCACCTGAATGTGCAGCTGCCCA
>probe:Drosophila_2:1638287_a_at:104:229; Interrogation_Position=2258; Antisense; AATGGCTTGATACCTGGCTTGCAGT
>probe:Drosophila_2:1638287_a_at:669:173; Interrogation_Position=2290; Antisense; AAAGCGCAGCGATGTTTCGTCCAGT
>probe:Drosophila_2:1638287_a_at:582:263; Interrogation_Position=2315; Antisense; CAGCTGCAGCTGACGGATACCAAGG
>probe:Drosophila_2:1638287_a_at:79:255; Interrogation_Position=2347; Antisense; CAACTTCTCCGGATCGGGCAAAAGT
>probe:Drosophila_2:1638287_a_at:618:711; Interrogation_Position=2384; Antisense; TTCTATGCCGGACGTACTTCATACG
>probe:Drosophila_2:1638287_a_at:28:489; Interrogation_Position=2397; Antisense; GTACTTCATACGATGTTCCCCAGAG
>probe:Drosophila_2:1638287_a_at:450:101; Interrogation_Position=2418; Antisense; AGAGCAGCGTTGGTCGACTGCCCAA
>probe:Drosophila_2:1638287_a_at:172:323; Interrogation_Position=2437; Antisense; GCCCAACGATATCACACAGCAACTG
>probe:Drosophila_2:1638287_a_at:415:721; Interrogation_Position=2471; Antisense; TTGCGGCGCTTCTGAACGAGATTTT

Paste this into a BLAST search page for me
TTACGCCCAATATCTTTGTGCCCTAGATATCCACGGGAAATATTGCCCAGTATTGCCCAGGGACCGGTGATAGCCGACGCCATGTGGATCACCTGAATGTGATCACCTGAATGTGCAGCTGCCCAAATGGCTTGATACCTGGCTTGCAGTAAAGCGCAGCGATGTTTCGTCCAGTCAGCTGCAGCTGACGGATACCAAGGCAACTTCTCCGGATCGGGCAAAAGTTTCTATGCCGGACGTACTTCATACGGTACTTCATACGATGTTCCCCAGAGAGAGCAGCGTTGGTCGACTGCCCAAGCCCAACGATATCACACAGCAACTGTTGCGGCGCTTCTGAACGAGATTTT

Full Affymetrix probeset data:

Annotations for 1638287_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720