FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638432_a_at:

>probe:Drosophila_2:1638432_a_at:102:171; Interrogation_Position=2928; Antisense; AAAGTCGCTGGACATGTCGGCACCG
>probe:Drosophila_2:1638432_a_at:203:481; Interrogation_Position=2943; Antisense; GTCGGCACCGCCCACTGATGATAAC
>probe:Drosophila_2:1638432_a_at:205:443; Interrogation_Position=2959; Antisense; GATGATAACCAGTGCTTCGTGGACG
>probe:Drosophila_2:1638432_a_at:158:519; Interrogation_Position=2977; Antisense; GTGGACGTCCGGCTCATCGACTTTG
>probe:Drosophila_2:1638432_a_at:605:11; Interrogation_Position=3012; Antisense; ATTCGTGCCGCGCAATGGCACCATG
>probe:Drosophila_2:1638432_a_at:423:461; Interrogation_Position=3083; Antisense; GATTCCTTACCGGTCTGGATAGCCT
>probe:Drosophila_2:1638432_a_at:407:201; Interrogation_Position=3109; Antisense; AACCGCCTGCTCAACGAAATTGTGG
>probe:Drosophila_2:1638432_a_at:678:161; Interrogation_Position=3125; Antisense; AAATTGTGGCCGAGGAACGCGCCTA
>probe:Drosophila_2:1638432_a_at:678:381; Interrogation_Position=3139; Antisense; GAACGCGCCTAAGCTCGCTATAGAA
>probe:Drosophila_2:1638432_a_at:59:337; Interrogation_Position=3151; Antisense; GCTCGCTATAGAAACCACATCGGGA
>probe:Drosophila_2:1638432_a_at:661:359; Interrogation_Position=3202; Antisense; GCAACTGGGCGGGAACACACAAGTT
>probe:Drosophila_2:1638432_a_at:248:359; Interrogation_Position=3340; Antisense; TAACAACCGGATATAGACCTTAACT
>probe:Drosophila_2:1638432_a_at:284:235; Interrogation_Position=3424; Antisense; AATCGCAGCATTTGTGGAGAACCAG
>probe:Drosophila_2:1638432_a_at:26:491; Interrogation_Position=3473; Antisense; GTAAACAAGTCGCTTCCAAAAGTAG

Paste this into a BLAST search page for me
AAAGTCGCTGGACATGTCGGCACCGGTCGGCACCGCCCACTGATGATAACGATGATAACCAGTGCTTCGTGGACGGTGGACGTCCGGCTCATCGACTTTGATTCGTGCCGCGCAATGGCACCATGGATTCCTTACCGGTCTGGATAGCCTAACCGCCTGCTCAACGAAATTGTGGAAATTGTGGCCGAGGAACGCGCCTAGAACGCGCCTAAGCTCGCTATAGAAGCTCGCTATAGAAACCACATCGGGAGCAACTGGGCGGGAACACACAAGTTTAACAACCGGATATAGACCTTAACTAATCGCAGCATTTGTGGAGAACCAGGTAAACAAGTCGCTTCCAAAAGTAG

Full Affymetrix probeset data:

Annotations for 1638432_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720