FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638439_a_at:

>probe:Drosophila_2:1638439_a_at:544:705; Interrogation_Position=1006; Antisense; TTAGGCATATGTTTGTTCCAGCCGT
>probe:Drosophila_2:1638439_a_at:97:407; Interrogation_Position=462; Antisense; GACTGTAGATGGGTACCTCTTGCGA
>probe:Drosophila_2:1638439_a_at:649:223; Interrogation_Position=511; Antisense; AAGGATCAGCAGTCTCAGCGCAAAA
>probe:Drosophila_2:1638439_a_at:500:681; Interrogation_Position=541; Antisense; TATGCTCAGCAATCGCAAGTCCGAA
>probe:Drosophila_2:1638439_a_at:484:393; Interrogation_Position=563; Antisense; GAAAGATTCGTGCTCGCATGACCGA
>probe:Drosophila_2:1638439_a_at:471:517; Interrogation_Position=608; Antisense; GTGGTGCCGATCTAAAGCAGCTTGT
>probe:Drosophila_2:1638439_a_at:264:333; Interrogation_Position=639; Antisense; GCTGGCCTTGGACTCGATTGCGAAA
>probe:Drosophila_2:1638439_a_at:299:207; Interrogation_Position=675; Antisense; AAGCTGTCAGCGCATATATCCATTA
>probe:Drosophila_2:1638439_a_at:594:391; Interrogation_Position=735; Antisense; GAAACCGCGCTTCGATGTCTCAAAG
>probe:Drosophila_2:1638439_a_at:67:209; Interrogation_Position=757; Antisense; AAGCTTCTGGAATTGCATGGCGATG
>probe:Drosophila_2:1638439_a_at:199:1; Interrogation_Position=790; Antisense; AAATCCGTGGAAGCCGTTGTTTCAT
>probe:Drosophila_2:1638439_a_at:652:467; Interrogation_Position=805; Antisense; GTTGTTTCATCCGAGGGAGCCGTAA
>probe:Drosophila_2:1638439_a_at:65:555; Interrogation_Position=820; Antisense; GGAGCCGTAATCGACCGCCCTGAAG
>probe:Drosophila_2:1638439_a_at:73:563; Interrogation_Position=990; Antisense; GGAAGTCTTTCGTCTTTTAGGCATA

Paste this into a BLAST search page for me
TTAGGCATATGTTTGTTCCAGCCGTGACTGTAGATGGGTACCTCTTGCGAAAGGATCAGCAGTCTCAGCGCAAAATATGCTCAGCAATCGCAAGTCCGAAGAAAGATTCGTGCTCGCATGACCGAGTGGTGCCGATCTAAAGCAGCTTGTGCTGGCCTTGGACTCGATTGCGAAAAAGCTGTCAGCGCATATATCCATTAGAAACCGCGCTTCGATGTCTCAAAGAAGCTTCTGGAATTGCATGGCGATGAAATCCGTGGAAGCCGTTGTTTCATGTTGTTTCATCCGAGGGAGCCGTAAGGAGCCGTAATCGACCGCCCTGAAGGGAAGTCTTTCGTCTTTTAGGCATA

Full Affymetrix probeset data:

Annotations for 1638439_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720