FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638441_a_at:

>probe:Drosophila_2:1638441_a_at:515:205; Interrogation_Position=3115; Antisense; AAGCGGCCTTTTTGCAGTCCGTGTT
>probe:Drosophila_2:1638441_a_at:104:43; Interrogation_Position=3144; Antisense; ATCGCCACGGAATCTTACCGGTTGG
>probe:Drosophila_2:1638441_a_at:77:531; Interrogation_Position=3169; Antisense; GGGATATCCCCAACTACAACATCTT
>probe:Drosophila_2:1638441_a_at:485:541; Interrogation_Position=3196; Antisense; GGTTGAGTCTCACCGAACTGGAACT
>probe:Drosophila_2:1638441_a_at:640:141; Interrogation_Position=3218; Antisense; ACTGGACATTCTGACGGGCAACCAT
>probe:Drosophila_2:1638441_a_at:609:43; Interrogation_Position=3246; Antisense; ATCCGCCGGGTTGACATCCTAGAGG
>probe:Drosophila_2:1638441_a_at:498:391; Interrogation_Position=3279; Antisense; GAAAGCCTGAGTCCACATATAGATG
>probe:Drosophila_2:1638441_a_at:3:481; Interrogation_Position=3334; Antisense; GTTTGGGATACTATCTCACCGAGCA
>probe:Drosophila_2:1638441_a_at:343:421; Interrogation_Position=3354; Antisense; GAGCAGCTGGTTTACGATCGTCAGA
>probe:Drosophila_2:1638441_a_at:507:95; Interrogation_Position=3385; Antisense; AGATTCTGACAAACCGCACCTGGAA
>probe:Drosophila_2:1638441_a_at:564:543; Interrogation_Position=3431; Antisense; GGATATCCCGATAGACTTTCGCATC
>probe:Drosophila_2:1638441_a_at:150:697; Interrogation_Position=3447; Antisense; TTTCGCATCGAGTTGCTCCAGAAGA
>probe:Drosophila_2:1638441_a_at:177:595; Interrogation_Position=3484; Antisense; TGGGCTTTATGCGATCCAAGGCCAC
>probe:Drosophila_2:1638441_a_at:294:599; Interrogation_Position=3533; Antisense; TGTCGGAGCTCTGTTCGCCATGCAA

Paste this into a BLAST search page for me
AAGCGGCCTTTTTGCAGTCCGTGTTATCGCCACGGAATCTTACCGGTTGGGGGATATCCCCAACTACAACATCTTGGTTGAGTCTCACCGAACTGGAACTACTGGACATTCTGACGGGCAACCATATCCGCCGGGTTGACATCCTAGAGGGAAAGCCTGAGTCCACATATAGATGGTTTGGGATACTATCTCACCGAGCAGAGCAGCTGGTTTACGATCGTCAGAAGATTCTGACAAACCGCACCTGGAAGGATATCCCGATAGACTTTCGCATCTTTCGCATCGAGTTGCTCCAGAAGATGGGCTTTATGCGATCCAAGGCCACTGTCGGAGCTCTGTTCGCCATGCAA

Full Affymetrix probeset data:

Annotations for 1638441_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720