FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638466_a_at:

>probe:Drosophila_2:1638466_a_at:649:383; Interrogation_Position=1312; Antisense; GAACTCACCGCTCTATAATCTTAAT
>probe:Drosophila_2:1638466_a_at:639:43; Interrogation_Position=1376; Antisense; ATCCTAGAGGGCACCGTGGAGTCCA
>probe:Drosophila_2:1638466_a_at:334:421; Interrogation_Position=1408; Antisense; GAGCACTCAAGCCAGATCCAGCTAT
>probe:Drosophila_2:1638466_a_at:209:39; Interrogation_Position=1491; Antisense; ATCTGCAGGCCTATGAAATCGACTA
>probe:Drosophila_2:1638466_a_at:245:235; Interrogation_Position=1507; Antisense; AATCGACTACGCTCGCTTTAACGAA
>probe:Drosophila_2:1638466_a_at:533:647; Interrogation_Position=1537; Antisense; TCAGGTGGACACTCCGTTGTGCAGT
>probe:Drosophila_2:1638466_a_at:462:547; Interrogation_Position=1594; Antisense; GGAGGGATTCCGCACACCAGAAACC
>probe:Drosophila_2:1638466_a_at:390:107; Interrogation_Position=1612; Antisense; AGAAACCACCTTTACCATGCGTCAA
>probe:Drosophila_2:1638466_a_at:679:677; Interrogation_Position=1667; Antisense; TAGGCGCAGATTCCAGTGTTTCGTC
>probe:Drosophila_2:1638466_a_at:728:291; Interrogation_Position=1688; Antisense; CGTCCCTTGTGTTGCTATAGTTGTA
>probe:Drosophila_2:1638466_a_at:26:601; Interrogation_Position=1709; Antisense; TGTAATCGTGTTTGTCCTATCTTCC
>probe:Drosophila_2:1638466_a_at:73:237; Interrogation_Position=1744; Antisense; AATCGAGGTGCTCCTGCAGTTCCGG
>probe:Drosophila_2:1638466_a_at:479:505; Interrogation_Position=1815; Antisense; GTGCCCTTGTAATGGTCCTCGACTA
>probe:Drosophila_2:1638466_a_at:417:631; Interrogation_Position=1830; Antisense; TCCTCGACTATCAACGCACTTAAAT

Paste this into a BLAST search page for me
GAACTCACCGCTCTATAATCTTAATATCCTAGAGGGCACCGTGGAGTCCAGAGCACTCAAGCCAGATCCAGCTATATCTGCAGGCCTATGAAATCGACTAAATCGACTACGCTCGCTTTAACGAATCAGGTGGACACTCCGTTGTGCAGTGGAGGGATTCCGCACACCAGAAACCAGAAACCACCTTTACCATGCGTCAATAGGCGCAGATTCCAGTGTTTCGTCCGTCCCTTGTGTTGCTATAGTTGTATGTAATCGTGTTTGTCCTATCTTCCAATCGAGGTGCTCCTGCAGTTCCGGGTGCCCTTGTAATGGTCCTCGACTATCCTCGACTATCAACGCACTTAAAT

Full Affymetrix probeset data:

Annotations for 1638466_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720