FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638498_s_at:

>probe:Drosophila_2:1638498_s_at:173:207; Interrogation_Position=1438; Antisense; AAGCTGTGCAACTCCGAGATACCCG
>probe:Drosophila_2:1638498_s_at:522:631; Interrogation_Position=1475; Antisense; TCCGTTTCCACGACATTGAGTAGGC
>probe:Drosophila_2:1638498_s_at:492:681; Interrogation_Position=1511; Antisense; TATGGTTCCCCATCAAGGCATTAAC
>probe:Drosophila_2:1638498_s_at:567:541; Interrogation_Position=1547; Antisense; GGATATCTGTTAGCTGTATTCGGAA
>probe:Drosophila_2:1638498_s_at:440:325; Interrogation_Position=1608; Antisense; GCGACACTCTCGAAGCGGATTCAGA
>probe:Drosophila_2:1638498_s_at:692:167; Interrogation_Position=1632; Antisense; AAATGTGCTTATTTTGTAGCCGGTC
>probe:Drosophila_2:1638498_s_at:561:485; Interrogation_Position=1647; Antisense; GTAGCCGGTCATTGTTTTGTAACCT
>probe:Drosophila_2:1638498_s_at:107:493; Interrogation_Position=1665; Antisense; GTAACCTTAATTTTGGACTGCAGAC
>probe:Drosophila_2:1638498_s_at:261:143; Interrogation_Position=1681; Antisense; ACTGCAGACGAACTCCTCGTTTTAA
>probe:Drosophila_2:1638498_s_at:466:689; Interrogation_Position=1765; Antisense; TTTGTAAGCCACCACCATGATTCTA
>probe:Drosophila_2:1638498_s_at:40:703; Interrogation_Position=1791; Antisense; TTTTGCAAAGTCACCCATCACATCG
>probe:Drosophila_2:1638498_s_at:238:33; Interrogation_Position=1807; Antisense; ATCACATCGCCATATTAGCCGGAGT
>probe:Drosophila_2:1638498_s_at:238:289; Interrogation_Position=1826; Antisense; CGGAGTCAAAATTCGGCGGCTTCTT
>probe:Drosophila_2:1638498_s_at:134:575; Interrogation_Position=1840; Antisense; GGCGGCTTCTTCAATGATTTTCGAT

Paste this into a BLAST search page for me
AAGCTGTGCAACTCCGAGATACCCGTCCGTTTCCACGACATTGAGTAGGCTATGGTTCCCCATCAAGGCATTAACGGATATCTGTTAGCTGTATTCGGAAGCGACACTCTCGAAGCGGATTCAGAAAATGTGCTTATTTTGTAGCCGGTCGTAGCCGGTCATTGTTTTGTAACCTGTAACCTTAATTTTGGACTGCAGACACTGCAGACGAACTCCTCGTTTTAATTTGTAAGCCACCACCATGATTCTATTTTGCAAAGTCACCCATCACATCGATCACATCGCCATATTAGCCGGAGTCGGAGTCAAAATTCGGCGGCTTCTTGGCGGCTTCTTCAATGATTTTCGAT

Full Affymetrix probeset data:

Annotations for 1638498_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720