FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638556_s_at:

>probe:Drosophila_2:1638556_s_at:580:173; Interrogation_Position=3478; Antisense; AAAGCGTCATTTTCCTCAGTGCAGA
>probe:Drosophila_2:1638556_s_at:698:351; Interrogation_Position=3498; Antisense; GCAGAACTCAGGCAGCTTAACGTCA
>probe:Drosophila_2:1638556_s_at:666:195; Interrogation_Position=3516; Antisense; AACGTCAGCTGAGACAATCCTTTGA
>probe:Drosophila_2:1638556_s_at:569:169; Interrogation_Position=3565; Antisense; AAAGGAGCCGCTTCTCGTGCGGATT
>probe:Drosophila_2:1638556_s_at:420:329; Interrogation_Position=3583; Antisense; GCGGATTTGTCCTAGCTTTGAGCAA
>probe:Drosophila_2:1638556_s_at:515:499; Interrogation_Position=3657; Antisense; GTCTGCATCGACTTATATTCCTAGC
>probe:Drosophila_2:1638556_s_at:539:21; Interrogation_Position=3671; Antisense; ATATTCCTAGCCTTGGATGGCCAAG
>probe:Drosophila_2:1638556_s_at:178:499; Interrogation_Position=3721; Antisense; GTCTAGCTAGGATATCACTGGCACT
>probe:Drosophila_2:1638556_s_at:194:35; Interrogation_Position=3734; Antisense; ATCACTGGCACTTGAGAGTTGTACC
>probe:Drosophila_2:1638556_s_at:233:413; Interrogation_Position=3749; Antisense; GAGTTGTACCTTTTAACTTCCGCAT
>probe:Drosophila_2:1638556_s_at:638:201; Interrogation_Position=3835; Antisense; AACCATTACCCAGTGCTAAACTAGT
>probe:Drosophila_2:1638556_s_at:567:601; Interrogation_Position=3867; Antisense; TGTTAATGTTGTACTCTTGGCCCGA
>probe:Drosophila_2:1638556_s_at:219:147; Interrogation_Position=3879; Antisense; ACTCTTGGCCCGAGGAGATTATTCT
>probe:Drosophila_2:1638556_s_at:511:285; Interrogation_Position=3902; Antisense; CTGAGATATATCTGTGTCCTGAATA

Paste this into a BLAST search page for me
AAAGCGTCATTTTCCTCAGTGCAGAGCAGAACTCAGGCAGCTTAACGTCAAACGTCAGCTGAGACAATCCTTTGAAAAGGAGCCGCTTCTCGTGCGGATTGCGGATTTGTCCTAGCTTTGAGCAAGTCTGCATCGACTTATATTCCTAGCATATTCCTAGCCTTGGATGGCCAAGGTCTAGCTAGGATATCACTGGCACTATCACTGGCACTTGAGAGTTGTACCGAGTTGTACCTTTTAACTTCCGCATAACCATTACCCAGTGCTAAACTAGTTGTTAATGTTGTACTCTTGGCCCGAACTCTTGGCCCGAGGAGATTATTCTCTGAGATATATCTGTGTCCTGAATA

Full Affymetrix probeset data:

Annotations for 1638556_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720