FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638558_a_at:

>probe:Drosophila_2:1638558_a_at:629:129; Interrogation_Position=1496; Antisense; ACCTCCATGCACACGATTTGCAGTA
>probe:Drosophila_2:1638558_a_at:560:559; Interrogation_Position=1556; Antisense; GGAAAGTAGCATCCCAAGTCAACGT
>probe:Drosophila_2:1638558_a_at:206:491; Interrogation_Position=1573; Antisense; GTCAACGTAAATATACCCTTACAAG
>probe:Drosophila_2:1638558_a_at:694:301; Interrogation_Position=1588; Antisense; CCCTTACAAGCAAAACGGTCCTCAT
>probe:Drosophila_2:1638558_a_at:715:535; Interrogation_Position=1604; Antisense; GGTCCTCATGGTTTTAAGCTTAACT
>probe:Drosophila_2:1638558_a_at:698:203; Interrogation_Position=1619; Antisense; AAGCTTAACTCGCATAAATTTGTAT
>probe:Drosophila_2:1638558_a_at:341:537; Interrogation_Position=1738; Antisense; GGTAGGACTCTGTTAGGTATCTGTT
>probe:Drosophila_2:1638558_a_at:615:481; Interrogation_Position=1754; Antisense; GTATCTGTTGTTTGGTTTACCAGTT
>probe:Drosophila_2:1638558_a_at:539:247; Interrogation_Position=1808; Antisense; AATTGACGCAAACTGTTCATGGCTA
>probe:Drosophila_2:1638558_a_at:645:267; Interrogation_Position=1825; Antisense; CATGGCTATATCGACAAGGTGTTTC
>probe:Drosophila_2:1638558_a_at:136:201; Interrogation_Position=1879; Antisense; AACGCTTAGTAAGGCTATGAATTGC
>probe:Drosophila_2:1638558_a_at:724:229; Interrogation_Position=1907; Antisense; AATGTTCTTTGCTGATTGTCGCTAC
>probe:Drosophila_2:1638558_a_at:421:5; Interrogation_Position=1921; Antisense; ATTGTCGCTACGTAACTCATAAGTT
>probe:Drosophila_2:1638558_a_at:708:473; Interrogation_Position=2054; Antisense; GTTATCCAGCATACTAATGTAGTCA

Paste this into a BLAST search page for me
ACCTCCATGCACACGATTTGCAGTAGGAAAGTAGCATCCCAAGTCAACGTGTCAACGTAAATATACCCTTACAAGCCCTTACAAGCAAAACGGTCCTCATGGTCCTCATGGTTTTAAGCTTAACTAAGCTTAACTCGCATAAATTTGTATGGTAGGACTCTGTTAGGTATCTGTTGTATCTGTTGTTTGGTTTACCAGTTAATTGACGCAAACTGTTCATGGCTACATGGCTATATCGACAAGGTGTTTCAACGCTTAGTAAGGCTATGAATTGCAATGTTCTTTGCTGATTGTCGCTACATTGTCGCTACGTAACTCATAAGTTGTTATCCAGCATACTAATGTAGTCA

Full Affymetrix probeset data:

Annotations for 1638558_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720