FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638560_a_at:

>probe:Drosophila_2:1638560_a_at:663:49; Interrogation_Position=5978; Antisense; ATGCGAACGGTCACATATGAAATTT
>probe:Drosophila_2:1638560_a_at:628:379; Interrogation_Position=6027; Antisense; GAACCAGGTAGCAGAGACCGAGCAA
>probe:Drosophila_2:1638560_a_at:355:643; Interrogation_Position=6058; Antisense; TCTCAACGCCGCTGAGAGCGATATT
>probe:Drosophila_2:1638560_a_at:505:417; Interrogation_Position=6073; Antisense; GAGCGATATTTATAGACGGTGAGCA
>probe:Drosophila_2:1638560_a_at:422:467; Interrogation_Position=6172; Antisense; GTTGTCAAAGTAGCTTACCTCCCAG
>probe:Drosophila_2:1638560_a_at:548:281; Interrogation_Position=6190; Antisense; CTCCCAGCCAACTCAATGATGTATC
>probe:Drosophila_2:1638560_a_at:236:271; Interrogation_Position=6214; Antisense; CATTTTGCAAATTCGTAACCTCTAA
>probe:Drosophila_2:1638560_a_at:564:657; Interrogation_Position=6229; Antisense; TAACCTCTAAGAGTCCCTCAGTTAG
>probe:Drosophila_2:1638560_a_at:343:503; Interrogation_Position=6241; Antisense; GTCCCTCAGTTAGTCTACTCGTATA
>probe:Drosophila_2:1638560_a_at:593:167; Interrogation_Position=6279; Antisense; AAATGTTTCCGCACAACAACAAGAG
>probe:Drosophila_2:1638560_a_at:359:419; Interrogation_Position=6301; Antisense; GAGCAGCCACTGCAACATTAACCAG
>probe:Drosophila_2:1638560_a_at:419:11; Interrogation_Position=6317; Antisense; ATTAACCAGAACCAACCAATGTTTG
>probe:Drosophila_2:1638560_a_at:623:309; Interrogation_Position=6332; Antisense; CCAATGTTTGATCTTCTTATACGCA
>probe:Drosophila_2:1638560_a_at:648:385; Interrogation_Position=6429; Antisense; GAACACATCTAGCTTGTTAAACGTA

Paste this into a BLAST search page for me
ATGCGAACGGTCACATATGAAATTTGAACCAGGTAGCAGAGACCGAGCAATCTCAACGCCGCTGAGAGCGATATTGAGCGATATTTATAGACGGTGAGCAGTTGTCAAAGTAGCTTACCTCCCAGCTCCCAGCCAACTCAATGATGTATCCATTTTGCAAATTCGTAACCTCTAATAACCTCTAAGAGTCCCTCAGTTAGGTCCCTCAGTTAGTCTACTCGTATAAAATGTTTCCGCACAACAACAAGAGGAGCAGCCACTGCAACATTAACCAGATTAACCAGAACCAACCAATGTTTGCCAATGTTTGATCTTCTTATACGCAGAACACATCTAGCTTGTTAAACGTA

Full Affymetrix probeset data:

Annotations for 1638560_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720