FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638562_a_at:

>probe:Drosophila_2:1638562_a_at:207:151; Interrogation_Position=1033; Antisense; ACATCCTTTACCCTATACGAGCTAA
>probe:Drosophila_2:1638562_a_at:200:561; Interrogation_Position=1091; Antisense; GGAAAGCTGACATACGACGCCATCT
>probe:Drosophila_2:1638562_a_at:371:71; Interrogation_Position=1134; Antisense; AGGCGTGTATACTCGAGACTGCTCG
>probe:Drosophila_2:1638562_a_at:230:299; Interrogation_Position=1168; Antisense; CGCTCTGCCACTGCTGAATAGAATC
>probe:Drosophila_2:1638562_a_at:306:367; Interrogation_Position=1188; Antisense; GAATCTGCACCAAGGACTATCCTGT
>probe:Drosophila_2:1638562_a_at:77:683; Interrogation_Position=1205; Antisense; TATCCTGTGCCCGATAGCAAACTTG
>probe:Drosophila_2:1638562_a_at:236:37; Interrogation_Position=1250; Antisense; ATCATAATCTCCCTCATCGGAATGC
>probe:Drosophila_2:1638562_a_at:404:1; Interrogation_Position=1303; Antisense; GCTTGCCTACAAACCGGAACGGTAT
>probe:Drosophila_2:1638562_a_at:504:577; Interrogation_Position=1357; Antisense; GGCCTATTTGCCATTCGGCGAGGGA
>probe:Drosophila_2:1638562_a_at:153:555; Interrogation_Position=1379; Antisense; GGACCCAGGATGTGTATCGGCGCCC
>probe:Drosophila_2:1638562_a_at:618:463; Interrogation_Position=1432; Antisense; GATTGCCAAGGTTTTGTCGAACTTC
>probe:Drosophila_2:1638562_a_at:172:513; Interrogation_Position=1499; Antisense; GTGTATGGAATACCGCTGATGCCCA
>probe:Drosophila_2:1638562_a_at:609:445; Interrogation_Position=1516; Antisense; GATGCCCAAATCAGGTGTTCCCGTG
>probe:Drosophila_2:1638562_a_at:315:305; Interrogation_Position=1536; Antisense; CCGTGCGTCTGTCTCTCAAAAAGTA

Paste this into a BLAST search page for me
ACATCCTTTACCCTATACGAGCTAAGGAAAGCTGACATACGACGCCATCTAGGCGTGTATACTCGAGACTGCTCGCGCTCTGCCACTGCTGAATAGAATCGAATCTGCACCAAGGACTATCCTGTTATCCTGTGCCCGATAGCAAACTTGATCATAATCTCCCTCATCGGAATGCGCTTGCCTACAAACCGGAACGGTATGGCCTATTTGCCATTCGGCGAGGGAGGACCCAGGATGTGTATCGGCGCCCGATTGCCAAGGTTTTGTCGAACTTCGTGTATGGAATACCGCTGATGCCCAGATGCCCAAATCAGGTGTTCCCGTGCCGTGCGTCTGTCTCTCAAAAAGTA

Full Affymetrix probeset data:

Annotations for 1638562_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720