FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638609_s_at:

>probe:Drosophila_2:1638609_s_at:617:105; Interrogation_Position=3279; Antisense; AGACAATCTGGACTCTACTGCGTTG
>probe:Drosophila_2:1638609_s_at:689:651; Interrogation_Position=3294; Antisense; TACTGCGTTGACACCGGTTAAGCGT
>probe:Drosophila_2:1638609_s_at:299:709; Interrogation_Position=3311; Antisense; TTAAGCGTGCAAAATTGGAGGCCCC
>probe:Drosophila_2:1638609_s_at:96:77; Interrogation_Position=3380; Antisense; AGGAGTGCCAGTACCGTTTGATCGA
>probe:Drosophila_2:1638609_s_at:446:235; Interrogation_Position=3422; Antisense; AATCCTTGGTTCTCGATCGGCTGAA
>probe:Drosophila_2:1638609_s_at:574:709; Interrogation_Position=3499; Antisense; TTAAAGGACGCTGACATCTCGACCA
>probe:Drosophila_2:1638609_s_at:602:159; Interrogation_Position=3523; Antisense; ACAAAAGAGGCGCTGGCCACGTTTA
>probe:Drosophila_2:1638609_s_at:459:579; Interrogation_Position=3537; Antisense; GGCCACGTTTATTAAGGAGCTCGAA
>probe:Drosophila_2:1638609_s_at:690:553; Interrogation_Position=3552; Antisense; GGAGCTCGAAACCATGAAGCGCCTT
>probe:Drosophila_2:1638609_s_at:425:521; Interrogation_Position=3592; Antisense; GTGGCCAATATGAAGCAGACCCTCA
>probe:Drosophila_2:1638609_s_at:185:103; Interrogation_Position=3608; Antisense; AGACCCTCAGAGATTCTGCCACTAG
>probe:Drosophila_2:1638609_s_at:247:487; Interrogation_Position=3636; Antisense; GTAGCATTTCTATTGATCACGGTTA
>probe:Drosophila_2:1638609_s_at:657:479; Interrogation_Position=3703; Antisense; GTTTCCATAATTTTGCAGACGTGTA
>probe:Drosophila_2:1638609_s_at:193:675; Interrogation_Position=3730; Antisense; TAGTAACCGTACAAGCTTTTTCTCT

Paste this into a BLAST search page for me
AGACAATCTGGACTCTACTGCGTTGTACTGCGTTGACACCGGTTAAGCGTTTAAGCGTGCAAAATTGGAGGCCCCAGGAGTGCCAGTACCGTTTGATCGAAATCCTTGGTTCTCGATCGGCTGAATTAAAGGACGCTGACATCTCGACCAACAAAAGAGGCGCTGGCCACGTTTAGGCCACGTTTATTAAGGAGCTCGAAGGAGCTCGAAACCATGAAGCGCCTTGTGGCCAATATGAAGCAGACCCTCAAGACCCTCAGAGATTCTGCCACTAGGTAGCATTTCTATTGATCACGGTTAGTTTCCATAATTTTGCAGACGTGTATAGTAACCGTACAAGCTTTTTCTCT

Full Affymetrix probeset data:

Annotations for 1638609_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720