FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638640_at:

>probe:Drosophila_2:1638640_at:631:513; Interrogation_Position=256; Antisense; GTGTAATGCTACATCGACGGAGGAC
>probe:Drosophila_2:1638640_at:451:125; Interrogation_Position=331; Antisense; AGCCTCCGATGCCAAGCGGTTTGAT
>probe:Drosophila_2:1638640_at:723:537; Interrogation_Position=387; Antisense; GGTAATTACGCTGGTGACTATCATC
>probe:Drosophila_2:1638640_at:715:679; Interrogation_Position=441; Antisense; TAGGATCTGTACCTTCTCTTACCAC
>probe:Drosophila_2:1638640_at:65:721; Interrogation_Position=496; Antisense; TTCCTGTGCGTGTGTGATGTCCTTT
>probe:Drosophila_2:1638640_at:381:701; Interrogation_Position=521; Antisense; TTTTCATTTCTGAGCGTCGTCCGCA
>probe:Drosophila_2:1638640_at:15:497; Interrogation_Position=561; Antisense; GTCATCATCAGCTAAAAGGCCCGAA
>probe:Drosophila_2:1638640_at:94:713; Interrogation_Position=615; Antisense; TTCTCATTGCCACCTGAACCAGTAA
>probe:Drosophila_2:1638640_at:444:373; Interrogation_Position=648; Antisense; GAAGAACGGACCCTGTTCGGACGCA
>probe:Drosophila_2:1638640_at:512:471; Interrogation_Position=662; Antisense; GTTCGGACGCATGTTGTTCTATTAT
>probe:Drosophila_2:1638640_at:491:19; Interrogation_Position=688; Antisense; ATATCCCCGTTGAGTTCTGGGTTGA
>probe:Drosophila_2:1638640_at:556:467; Interrogation_Position=708; Antisense; GTTGATGATTTTTCCATCTCCCCAA
>probe:Drosophila_2:1638640_at:192:271; Interrogation_Position=751; Antisense; GAATTGGAGGACATGCCGAGCCCCG
>probe:Drosophila_2:1638640_at:305:415; Interrogation_Position=768; Antisense; GAGCCCCGGACGCATATAATAATTT

Paste this into a BLAST search page for me
GTGTAATGCTACATCGACGGAGGACAGCCTCCGATGCCAAGCGGTTTGATGGTAATTACGCTGGTGACTATCATCTAGGATCTGTACCTTCTCTTACCACTTCCTGTGCGTGTGTGATGTCCTTTTTTTCATTTCTGAGCGTCGTCCGCAGTCATCATCAGCTAAAAGGCCCGAATTCTCATTGCCACCTGAACCAGTAAGAAGAACGGACCCTGTTCGGACGCAGTTCGGACGCATGTTGTTCTATTATATATCCCCGTTGAGTTCTGGGTTGAGTTGATGATTTTTCCATCTCCCCAAGAATTGGAGGACATGCCGAGCCCCGGAGCCCCGGACGCATATAATAATTT

Full Affymetrix probeset data:

Annotations for 1638640_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720