FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638682_a_at:

>probe:Drosophila_2:1638682_a_at:431:557; Interrogation_Position=3170; Antisense; GGACTTCATCCAACAAAGACACCAC
>probe:Drosophila_2:1638682_a_at:299:407; Interrogation_Position=3201; Antisense; GACGTATTAAGCACGCTAAGCTATT
>probe:Drosophila_2:1638682_a_at:555:279; Interrogation_Position=3216; Antisense; CTAAGCTATTTTAATGAAGCCGCAT
>probe:Drosophila_2:1638682_a_at:579:379; Interrogation_Position=3231; Antisense; GAAGCCGCATTTTAAATTACACTTA
>probe:Drosophila_2:1638682_a_at:566:509; Interrogation_Position=3260; Antisense; GTGCACGTATTTTAATGGAGACTTA
>probe:Drosophila_2:1638682_a_at:354:179; Interrogation_Position=3311; Antisense; AAAAGACTTGTATGTTGTACCAACA
>probe:Drosophila_2:1638682_a_at:401:599; Interrogation_Position=3323; Antisense; TGTTGTACCAACAGCTTGAATGAAA
>probe:Drosophila_2:1638682_a_at:94:565; Interrogation_Position=3358; Antisense; GGAATGCCCATCTAAATAAACCATG
>probe:Drosophila_2:1638682_a_at:235:123; Interrogation_Position=3533; Antisense; AGCGCAAGCTTACTATTTTGTTATA
>probe:Drosophila_2:1638682_a_at:289:475; Interrogation_Position=3552; Antisense; GTTATAAGAATGCATCCGGATAGGA
>probe:Drosophila_2:1638682_a_at:158:55; Interrogation_Position=3581; Antisense; ATGAAGACATGTTATTGCCACTAAT
>probe:Drosophila_2:1638682_a_at:132:491; Interrogation_Position=3640; Antisense; GTAAAATTACGATACTGCGCCTAGT
>probe:Drosophila_2:1638682_a_at:274:293; Interrogation_Position=3649; Antisense; CGATACTGCGCCTAGTTATGACTAA
>probe:Drosophila_2:1638682_a_at:61:389; Interrogation_Position=3715; Antisense; GAAAACGCAATGCTGTAATACCATT

Paste this into a BLAST search page for me
GGACTTCATCCAACAAAGACACCACGACGTATTAAGCACGCTAAGCTATTCTAAGCTATTTTAATGAAGCCGCATGAAGCCGCATTTTAAATTACACTTAGTGCACGTATTTTAATGGAGACTTAAAAAGACTTGTATGTTGTACCAACATGTTGTACCAACAGCTTGAATGAAAGGAATGCCCATCTAAATAAACCATGAGCGCAAGCTTACTATTTTGTTATAGTTATAAGAATGCATCCGGATAGGAATGAAGACATGTTATTGCCACTAATGTAAAATTACGATACTGCGCCTAGTCGATACTGCGCCTAGTTATGACTAAGAAAACGCAATGCTGTAATACCATT

Full Affymetrix probeset data:

Annotations for 1638682_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720