FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638696_a_at:

>probe:Drosophila_2:1638696_a_at:336:243; Interrogation_Position=1005; Antisense; AATATGCCACACAATCTGTTCCTCA
>probe:Drosophila_2:1638696_a_at:695:707; Interrogation_Position=1063; Antisense; TTAAGGTATTCGTATTTGCCCGCTC
>probe:Drosophila_2:1638696_a_at:723:717; Interrogation_Position=1078; Antisense; TTGCCCGCTCCGAGTACTGTGTAAA
>probe:Drosophila_2:1638696_a_at:129:511; Interrogation_Position=1135; Antisense; GTGAGTTGGCTGGTTACATTCCCTT
>probe:Drosophila_2:1638696_a_at:624:149; Interrogation_Position=1150; Antisense; ACATTCCCTTGCCAGATGCTGATAA
>probe:Drosophila_2:1638696_a_at:707:361; Interrogation_Position=1228; Antisense; GCAATGCTCCAAAGGCTGTGTACGA
>probe:Drosophila_2:1638696_a_at:586:105; Interrogation_Position=1280; Antisense; AGAATACTATCTTTGGGACCAACCA
>probe:Drosophila_2:1638696_a_at:679:415; Interrogation_Position=775; Antisense; GAGCGCTGGCATCTGTAAATCACCT
>probe:Drosophila_2:1638696_a_at:250:665; Interrogation_Position=790; Antisense; TAAATCACCTTCACTTTCATCTTCT
>probe:Drosophila_2:1638696_a_at:490:25; Interrogation_Position=837; Antisense; ATAGACCATGTTCCCTTGGATGAGC
>probe:Drosophila_2:1638696_a_at:542:287; Interrogation_Position=861; Antisense; CTGGCCGGTGGCTATGTTTATCGTT
>probe:Drosophila_2:1638696_a_at:331:1; Interrogation_Position=876; Antisense; GTTTATCGTTTGAGCCGTAGGGCGC
>probe:Drosophila_2:1638696_a_at:31:395; Interrogation_Position=959; Antisense; GAAAGTGGACCAGCTCTACATGCTC
>probe:Drosophila_2:1638696_a_at:113:271; Interrogation_Position=977; Antisense; CATGCTCGCCATGTGGATGTGCAAG

Paste this into a BLAST search page for me
AATATGCCACACAATCTGTTCCTCATTAAGGTATTCGTATTTGCCCGCTCTTGCCCGCTCCGAGTACTGTGTAAAGTGAGTTGGCTGGTTACATTCCCTTACATTCCCTTGCCAGATGCTGATAAGCAATGCTCCAAAGGCTGTGTACGAAGAATACTATCTTTGGGACCAACCAGAGCGCTGGCATCTGTAAATCACCTTAAATCACCTTCACTTTCATCTTCTATAGACCATGTTCCCTTGGATGAGCCTGGCCGGTGGCTATGTTTATCGTTGTTTATCGTTTGAGCCGTAGGGCGCGAAAGTGGACCAGCTCTACATGCTCCATGCTCGCCATGTGGATGTGCAAG

Full Affymetrix probeset data:

Annotations for 1638696_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720