FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638770_a_at:

>probe:Drosophila_2:1638770_a_at:171:523; Interrogation_Position=2897; Antisense; GGGCCGCAAGAGTTAGGACCTTACT
>probe:Drosophila_2:1638770_a_at:150:545; Interrogation_Position=2980; Antisense; GGCTTTATAACGCATTAACCAGGAA
>probe:Drosophila_2:1638770_a_at:137:655; Interrogation_Position=3008; Antisense; TAAACGGTTTCGACCTCTAAGGATG
>probe:Drosophila_2:1638770_a_at:580:279; Interrogation_Position=3024; Antisense; CTAAGGATGTCGTTGCGGGCTTGTT
>probe:Drosophila_2:1638770_a_at:150:569; Interrogation_Position=3041; Antisense; GGCTTGTTTCCCTTGGTAATCTCAT
>probe:Drosophila_2:1638770_a_at:293:39; Interrogation_Position=3059; Antisense; ATCTCATTTGAAAAGCGCTTCCGAT
>probe:Drosophila_2:1638770_a_at:175:371; Interrogation_Position=3120; Antisense; GAATGGCAGGCACGATCGTTCGTTT
>probe:Drosophila_2:1638770_a_at:636:449; Interrogation_Position=3133; Antisense; GATCGTTCGTTTTCTCTTAGGCGCA
>probe:Drosophila_2:1638770_a_at:721:275; Interrogation_Position=3148; Antisense; CTTAGGCGCATTTTGAATCCGTTTT
>probe:Drosophila_2:1638770_a_at:282:361; Interrogation_Position=3162; Antisense; GAATCCGTTTTTGGCGATTAGCTTA
>probe:Drosophila_2:1638770_a_at:638:487; Interrogation_Position=3292; Antisense; GTACGTCTAGCTATATGTATCTTGT
>probe:Drosophila_2:1638770_a_at:428:263; Interrogation_Position=3319; Antisense; CAGAGCTGTTCCAAATGTTCCGATT
>probe:Drosophila_2:1638770_a_at:572:591; Interrogation_Position=3415; Antisense; TGGTGCCAACTGTTGTGAGCACTCT
>probe:Drosophila_2:1638770_a_at:629:511; Interrogation_Position=3429; Antisense; GTGAGCACTCTAGGTTCGCGAATAA

Paste this into a BLAST search page for me
GGGCCGCAAGAGTTAGGACCTTACTGGCTTTATAACGCATTAACCAGGAATAAACGGTTTCGACCTCTAAGGATGCTAAGGATGTCGTTGCGGGCTTGTTGGCTTGTTTCCCTTGGTAATCTCATATCTCATTTGAAAAGCGCTTCCGATGAATGGCAGGCACGATCGTTCGTTTGATCGTTCGTTTTCTCTTAGGCGCACTTAGGCGCATTTTGAATCCGTTTTGAATCCGTTTTTGGCGATTAGCTTAGTACGTCTAGCTATATGTATCTTGTCAGAGCTGTTCCAAATGTTCCGATTTGGTGCCAACTGTTGTGAGCACTCTGTGAGCACTCTAGGTTCGCGAATAA

Full Affymetrix probeset data:

Annotations for 1638770_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720