FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638829_s_at:

>probe:Drosophila_2:1638829_s_at:275:211; Interrogation_Position=1379; Antisense; AAGACCAGAACAAGGGCGTCCTCTT
>probe:Drosophila_2:1638829_s_at:286:221; Interrogation_Position=1390; Antisense; AAGGGCGTCCTCTTGAAGCGCACCG
>probe:Drosophila_2:1638829_s_at:408:379; Interrogation_Position=1404; Antisense; GAAGCGCACCGCTCAGGGCGAGTTC
>probe:Drosophila_2:1638829_s_at:16:1; Interrogation_Position=1429; Antisense; CTGGTGGTCAACGGGAAGTCTTACA
>probe:Drosophila_2:1638829_s_at:364:495; Interrogation_Position=1446; Antisense; GTCTTACAAAAAAACCCGCGCCATG
>probe:Drosophila_2:1638829_s_at:711:51; Interrogation_Position=1468; Antisense; ATGCAGTACCGCACCTACTTCCATT
>probe:Drosophila_2:1638829_s_at:124:129; Interrogation_Position=1480; Antisense; ACCTACTTCCATTGCTTGACCAGGA
>probe:Drosophila_2:1638829_s_at:7:7; Interrogation_Position=1490; Antisense; ATTGCTTGACCAGGAACTGCCCGAC
>probe:Drosophila_2:1638829_s_at:552:129; Interrogation_Position=1513; Antisense; ACCTACTACGTCCTCGTGGAGCTGA
>probe:Drosophila_2:1638829_s_at:579:587; Interrogation_Position=1529; Antisense; TGGAGCTGAGCCGACGACCTCGACT
>probe:Drosophila_2:1638829_s_at:338:405; Interrogation_Position=1550; Antisense; GACTCACCAGGCATCATGAGCACGC
>probe:Drosophila_2:1638829_s_at:72:141; Interrogation_Position=1580; Antisense; ACTGTCTGCAGTGCTATTAGGATGT
>probe:Drosophila_2:1638829_s_at:559:479; Interrogation_Position=1612; Antisense; GTATGTAGTCATAGGCCGAATCCGC
>probe:Drosophila_2:1638829_s_at:69:89; Interrogation_Position=1618; Antisense; AGTCATAGGCCGAATCCGCAATGTA

Paste this into a BLAST search page for me
AAGACCAGAACAAGGGCGTCCTCTTAAGGGCGTCCTCTTGAAGCGCACCGGAAGCGCACCGCTCAGGGCGAGTTCCTGGTGGTCAACGGGAAGTCTTACAGTCTTACAAAAAAACCCGCGCCATGATGCAGTACCGCACCTACTTCCATTACCTACTTCCATTGCTTGACCAGGAATTGCTTGACCAGGAACTGCCCGACACCTACTACGTCCTCGTGGAGCTGATGGAGCTGAGCCGACGACCTCGACTGACTCACCAGGCATCATGAGCACGCACTGTCTGCAGTGCTATTAGGATGTGTATGTAGTCATAGGCCGAATCCGCAGTCATAGGCCGAATCCGCAATGTA

Full Affymetrix probeset data:

Annotations for 1638829_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720