FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638964_at:

>probe:Drosophila_2:1638964_at:328:613; Interrogation_Position=1247; Antisense; TGAACTTACACCCTGGAAACCTCAT
>probe:Drosophila_2:1638964_at:46:393; Interrogation_Position=1262; Antisense; GAAACCTCATCCAAGTCTGAAAGAG
>probe:Drosophila_2:1638964_at:112:101; Interrogation_Position=1283; Antisense; AGAGGTTGCTCTGTACGATAATAAA
>probe:Drosophila_2:1638964_at:623:651; Interrogation_Position=1388; Antisense; TCAATCAAACAACACGACTCCAACT
>probe:Drosophila_2:1638964_at:690:403; Interrogation_Position=1403; Antisense; GACTCCAACTTGTAAGCCGTGCATA
>probe:Drosophila_2:1638964_at:283:659; Interrogation_Position=1415; Antisense; TAAGCCGTGCATACCAGATGCCAGA
>probe:Drosophila_2:1638964_at:682:447; Interrogation_Position=1431; Antisense; GATGCCAGAGATTTTCCTACGAGTA
>probe:Drosophila_2:1638964_at:505:677; Interrogation_Position=1454; Antisense; TATAAGCGCCGACACAAACCAAACC
>probe:Drosophila_2:1638964_at:664:197; Interrogation_Position=1533; Antisense; AACGTACTGATGCTAGTTTCCCTGA
>probe:Drosophila_2:1638964_at:511:633; Interrogation_Position=1551; Antisense; TCCCTGATTGTTTCCTTGTTCGTAA
>probe:Drosophila_2:1638964_at:600:471; Interrogation_Position=1568; Antisense; GTTCGTAAACTCTTTTCTAATCGTG
>probe:Drosophila_2:1638964_at:537:391; Interrogation_Position=1615; Antisense; GAAACCAGTTCACGCAATCATCATC
>probe:Drosophila_2:1638964_at:420:239; Interrogation_Position=1630; Antisense; AATCATCATCGGTACCTGCCATAAT
>probe:Drosophila_2:1638964_at:419:367; Interrogation_Position=1754; Antisense; GAATCTCTTGAGTTTTTCCTACCAT

Paste this into a BLAST search page for me
TGAACTTACACCCTGGAAACCTCATGAAACCTCATCCAAGTCTGAAAGAGAGAGGTTGCTCTGTACGATAATAAATCAATCAAACAACACGACTCCAACTGACTCCAACTTGTAAGCCGTGCATATAAGCCGTGCATACCAGATGCCAGAGATGCCAGAGATTTTCCTACGAGTATATAAGCGCCGACACAAACCAAACCAACGTACTGATGCTAGTTTCCCTGATCCCTGATTGTTTCCTTGTTCGTAAGTTCGTAAACTCTTTTCTAATCGTGGAAACCAGTTCACGCAATCATCATCAATCATCATCGGTACCTGCCATAATGAATCTCTTGAGTTTTTCCTACCAT

Full Affymetrix probeset data:

Annotations for 1638964_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720