FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638979_a_at:

>probe:Drosophila_2:1638979_a_at:155:713; Interrogation_Position=4125; Antisense; TTCAGCGACCCAACGTTCGAGGAGA
>probe:Drosophila_2:1638979_a_at:389:681; Interrogation_Position=4197; Antisense; TATGGCTTGCACTTTATGCTCGGCA
>probe:Drosophila_2:1638979_a_at:160:393; Interrogation_Position=4250; Antisense; GAAAGTCATCATTCACAGCGCCGGC
>probe:Drosophila_2:1638979_a_at:15:123; Interrogation_Position=4311; Antisense; AGCGTGGATCTGTACGTGGTCACCA
>probe:Drosophila_2:1638979_a_at:123:519; Interrogation_Position=4326; Antisense; GTGGTCACCACCAGCAAGGATACGA
>probe:Drosophila_2:1638979_a_at:617:509; Interrogation_Position=4383; Antisense; GTGCACTTCATCAAAACCGAGGCTG
>probe:Drosophila_2:1638979_a_at:37:203; Interrogation_Position=4397; Antisense; AACCGAGGCTGTTATGCAGGCGCTC
>probe:Drosophila_2:1638979_a_at:359:577; Interrogation_Position=4415; Antisense; GGCGCTCGTTCAACACAACATTGAA
>probe:Drosophila_2:1638979_a_at:312:471; Interrogation_Position=4494; Antisense; GTTCTCCGCTTTTTGTTATCATTCG
>probe:Drosophila_2:1638979_a_at:3:687; Interrogation_Position=4510; Antisense; TATCATTCGTTAGCCATTATTCCAA
>probe:Drosophila_2:1638979_a_at:713:489; Interrogation_Position=4539; Antisense; GTACATCACACATCGAAGTCCCAGA
>probe:Drosophila_2:1638979_a_at:41:591; Interrogation_Position=4631; Antisense; TGGTTCCATCATAACTGTGGCCGCA
>probe:Drosophila_2:1638979_a_at:10:595; Interrogation_Position=4646; Antisense; TGTGGCCGCACAATATTTACTTGTT
>probe:Drosophila_2:1638979_a_at:313:475; Interrogation_Position=4668; Antisense; GTTACTTTCCTAATGCCTGTCAAAT

Paste this into a BLAST search page for me
TTCAGCGACCCAACGTTCGAGGAGATATGGCTTGCACTTTATGCTCGGCAGAAAGTCATCATTCACAGCGCCGGCAGCGTGGATCTGTACGTGGTCACCAGTGGTCACCACCAGCAAGGATACGAGTGCACTTCATCAAAACCGAGGCTGAACCGAGGCTGTTATGCAGGCGCTCGGCGCTCGTTCAACACAACATTGAAGTTCTCCGCTTTTTGTTATCATTCGTATCATTCGTTAGCCATTATTCCAAGTACATCACACATCGAAGTCCCAGATGGTTCCATCATAACTGTGGCCGCATGTGGCCGCACAATATTTACTTGTTGTTACTTTCCTAATGCCTGTCAAAT

Full Affymetrix probeset data:

Annotations for 1638979_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720