FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1638984_s_at:

>probe:Drosophila_2:1638984_s_at:290:451; Interrogation_Position=4878; Antisense; GATCGAATAGTAGTTGCATTGGCAG
>probe:Drosophila_2:1638984_s_at:646:719; Interrogation_Position=4891; Antisense; TTGCATTGGCAGTGGTAGTCATGTT
>probe:Drosophila_2:1638984_s_at:190:509; Interrogation_Position=4917; Antisense; GTGCTGGTAGCGGTAGTCAAGCAAA
>probe:Drosophila_2:1638984_s_at:504:493; Interrogation_Position=4932; Antisense; GTCAAGCAAATAGTGTCAAGCATCT
>probe:Drosophila_2:1638984_s_at:202:515; Interrogation_Position=4944; Antisense; GTGTCAAGCATCTGCAGAATAAGCA
>probe:Drosophila_2:1638984_s_at:124:31; Interrogation_Position=5150; Antisense; ATCAAACGGCTCACGGTACCAGGTC
>probe:Drosophila_2:1638984_s_at:725:287; Interrogation_Position=5156; Antisense; CGGCTCACGGTACCAGGTCAGGATA
>probe:Drosophila_2:1638984_s_at:688:535; Interrogation_Position=5164; Antisense; GGTACCAGGTCAGGATAGAAAATTG
>probe:Drosophila_2:1638984_s_at:331:697; Interrogation_Position=5206; Antisense; TTTCACCGAAAACTTGAACCAATCA
>probe:Drosophila_2:1638984_s_at:214:255; Interrogation_Position=5236; Antisense; CAAACTCTTCAATAAACCCAAGCTA
>probe:Drosophila_2:1638984_s_at:142:623; Interrogation_Position=5304; Antisense; TGCTGTAAAATGACATCTGATGCGC
>probe:Drosophila_2:1638984_s_at:33:41; Interrogation_Position=5318; Antisense; ATCTGATGCGCGAAATGTTTGTGTT
>probe:Drosophila_2:1638984_s_at:399:323; Interrogation_Position=5325; Antisense; GCGCGAAATGTTTGTGTTGCAACTT
>probe:Drosophila_2:1638984_s_at:110:505; Interrogation_Position=5338; Antisense; GTGTTGCAACTTTTGTAAAGCCCTA

Paste this into a BLAST search page for me
GATCGAATAGTAGTTGCATTGGCAGTTGCATTGGCAGTGGTAGTCATGTTGTGCTGGTAGCGGTAGTCAAGCAAAGTCAAGCAAATAGTGTCAAGCATCTGTGTCAAGCATCTGCAGAATAAGCAATCAAACGGCTCACGGTACCAGGTCCGGCTCACGGTACCAGGTCAGGATAGGTACCAGGTCAGGATAGAAAATTGTTTCACCGAAAACTTGAACCAATCACAAACTCTTCAATAAACCCAAGCTATGCTGTAAAATGACATCTGATGCGCATCTGATGCGCGAAATGTTTGTGTTGCGCGAAATGTTTGTGTTGCAACTTGTGTTGCAACTTTTGTAAAGCCCTA

Full Affymetrix probeset data:

Annotations for 1638984_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720