FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639001_a_at:

>probe:Drosophila_2:1639001_a_at:299:627; Interrogation_Position=1132; Antisense; TGCCGGTTTGTGGTGCCTATCGAAT
>probe:Drosophila_2:1639001_a_at:491:285; Interrogation_Position=1204; Antisense; CTGAGGCAGTGCTACTACGGCGATA
>probe:Drosophila_2:1639001_a_at:189:585; Interrogation_Position=1241; Antisense; TGGACACCCTGCATGAATACCTTCA
>probe:Drosophila_2:1639001_a_at:558:241; Interrogation_Position=1256; Antisense; AATACCTTCAGATGGTTTCCCACGA
>probe:Drosophila_2:1639001_a_at:300:257; Interrogation_Position=1276; Antisense; CACGAGTACTTCTGGTTCCCAATAT
>probe:Drosophila_2:1639001_a_at:347:243; Interrogation_Position=1296; Antisense; AATATACCGCACAGTATTGTCCCGC
>probe:Drosophila_2:1639001_a_at:120:483; Interrogation_Position=1347; Antisense; GTATTTGTACCGCTTCGACTTCGAC
>probe:Drosophila_2:1639001_a_at:536:451; Interrogation_Position=1441; Antisense; GATCTGTCCTACTTGTTCTACAACT
>probe:Drosophila_2:1639001_a_at:458:563; Interrogation_Position=1475; Antisense; GGAAGCTCAAGAACCACACGCGGGA
>probe:Drosophila_2:1639001_a_at:36:149; Interrogation_Position=1538; Antisense; ACTTTGCGGCATGTGGAAACCCCAA
>probe:Drosophila_2:1639001_a_at:166:579; Interrogation_Position=1608; Antisense; GGCCGTCGAGAAACACCAGCTGAAG
>probe:Drosophila_2:1639001_a_at:400:85; Interrogation_Position=1631; Antisense; AGTGCCTTAACATATCCGACGAGCT
>probe:Drosophila_2:1639001_a_at:395:137; Interrogation_Position=1667; Antisense; ACGTGCCCGACCTCAAGAAGTTGAT
>probe:Drosophila_2:1639001_a_at:51:529; Interrogation_Position=1697; Antisense; GGGAGAGTTTCTTTCGACGCGATGA

Paste this into a BLAST search page for me
TGCCGGTTTGTGGTGCCTATCGAATCTGAGGCAGTGCTACTACGGCGATATGGACACCCTGCATGAATACCTTCAAATACCTTCAGATGGTTTCCCACGACACGAGTACTTCTGGTTCCCAATATAATATACCGCACAGTATTGTCCCGCGTATTTGTACCGCTTCGACTTCGACGATCTGTCCTACTTGTTCTACAACTGGAAGCTCAAGAACCACACGCGGGAACTTTGCGGCATGTGGAAACCCCAAGGCCGTCGAGAAACACCAGCTGAAGAGTGCCTTAACATATCCGACGAGCTACGTGCCCGACCTCAAGAAGTTGATGGGAGAGTTTCTTTCGACGCGATGA

Full Affymetrix probeset data:

Annotations for 1639001_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720