FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639002_s_at:

>probe:Drosophila_2:1639002_s_at:124:495; Interrogation_Position=2488; Antisense; GTCACCTCACAAAGGTTCACCTGAA
>probe:Drosophila_2:1639002_s_at:235:541; Interrogation_Position=2501; Antisense; GGTTCACCTGAAGCGTGACATTCAA
>probe:Drosophila_2:1639002_s_at:654:611; Interrogation_Position=2516; Antisense; TGACATTCAAGCTGGCGACGGCACC
>probe:Drosophila_2:1639002_s_at:106:141; Interrogation_Position=2541; Antisense; ACGGGACACAGCAGCTTCGAGGACT
>probe:Drosophila_2:1639002_s_at:454:145; Interrogation_Position=2563; Antisense; ACTCGCGCGCCTGTATGGAACTGAT
>probe:Drosophila_2:1639002_s_at:571:383; Interrogation_Position=2580; Antisense; GAACTGATGCTGTGGCGGGTCAACC
>probe:Drosophila_2:1639002_s_at:568:201; Interrogation_Position=2601; Antisense; AACCGTGAGCTGGATCCCGCTTGGA
>probe:Drosophila_2:1639002_s_at:515:45; Interrogation_Position=2614; Antisense; ATCCCGCTTGGAGCTGGGACGATTA
>probe:Drosophila_2:1639002_s_at:623:13; Interrogation_Position=2635; Antisense; ATTAGAGGACTCGTTCGGGTGCGAA
>probe:Drosophila_2:1639002_s_at:246:715; Interrogation_Position=2648; Antisense; TTCGGGTGCGAATCTGTGACATTTG
>probe:Drosophila_2:1639002_s_at:604:275; Interrogation_Position=2709; Antisense; CTTTTAGTTGTTAAGCCAGCTCGTA
>probe:Drosophila_2:1639002_s_at:384:185; Interrogation_Position=2768; Antisense; AAAATCTCAGCTGGGTATCTCTCCT
>probe:Drosophila_2:1639002_s_at:479:279; Interrogation_Position=2786; Antisense; CTCTCCTGGCAATCGGTTTCTATAG
>probe:Drosophila_2:1639002_s_at:322:173; Interrogation_Position=2837; Antisense; AAACGTATAGGTGCCCATTGCCAGG

Paste this into a BLAST search page for me
GTCACCTCACAAAGGTTCACCTGAAGGTTCACCTGAAGCGTGACATTCAATGACATTCAAGCTGGCGACGGCACCACGGGACACAGCAGCTTCGAGGACTACTCGCGCGCCTGTATGGAACTGATGAACTGATGCTGTGGCGGGTCAACCAACCGTGAGCTGGATCCCGCTTGGAATCCCGCTTGGAGCTGGGACGATTAATTAGAGGACTCGTTCGGGTGCGAATTCGGGTGCGAATCTGTGACATTTGCTTTTAGTTGTTAAGCCAGCTCGTAAAAATCTCAGCTGGGTATCTCTCCTCTCTCCTGGCAATCGGTTTCTATAGAAACGTATAGGTGCCCATTGCCAGG

Full Affymetrix probeset data:

Annotations for 1639002_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720