FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639028_a_at:

>probe:Drosophila_2:1639028_a_at:46:385; Interrogation_Position=1895; Antisense; GAACACGACTTGATTCAGACGAAAC
>probe:Drosophila_2:1639028_a_at:671:389; Interrogation_Position=1915; Antisense; GAAACTAACTAATTGCAAGGGCCGA
>probe:Drosophila_2:1639028_a_at:164:521; Interrogation_Position=1933; Antisense; GGGCCGAGTGAAATTTCGTTGCTAA
>probe:Drosophila_2:1639028_a_at:621:385; Interrogation_Position=1972; Antisense; GAACATTATGACTGATTGCCACGAA
>probe:Drosophila_2:1639028_a_at:131:465; Interrogation_Position=1985; Antisense; GATTGCCACGAAACAGATTTGCCAA
>probe:Drosophila_2:1639028_a_at:392:467; Interrogation_Position=2085; Antisense; GTTGTGTCTACTCCCTCTAAAGTAA
>probe:Drosophila_2:1639028_a_at:57:205; Interrogation_Position=2162; Antisense; AAGCCAAACTTGCATGTCTAGAAAA
>probe:Drosophila_2:1639028_a_at:110:389; Interrogation_Position=2203; Antisense; GAAAACCGCGTCTTTGTGAACTGCA
>probe:Drosophila_2:1639028_a_at:55:89; Interrogation_Position=2271; Antisense; AGTCTACCATTAAGCTAAGCGCATA
>probe:Drosophila_2:1639028_a_at:514:123; Interrogation_Position=2288; Antisense; AGCGCATATGTATTTCAAGCCGCAT
>probe:Drosophila_2:1639028_a_at:651:695; Interrogation_Position=2300; Antisense; TTTCAAGCCGCATCGTCTAATCAAA
>probe:Drosophila_2:1639028_a_at:238:185; Interrogation_Position=2322; Antisense; AAAATCCGTAGCTACTTGGCAATGA
>probe:Drosophila_2:1639028_a_at:30:167; Interrogation_Position=2362; Antisense; AAATCCAATCGATCGCACGTAAATC
>probe:Drosophila_2:1639028_a_at:457:679; Interrogation_Position=2408; Antisense; TAGTGCCACGGCGTTTGTGAACCTA

Paste this into a BLAST search page for me
GAACACGACTTGATTCAGACGAAACGAAACTAACTAATTGCAAGGGCCGAGGGCCGAGTGAAATTTCGTTGCTAAGAACATTATGACTGATTGCCACGAAGATTGCCACGAAACAGATTTGCCAAGTTGTGTCTACTCCCTCTAAAGTAAAAGCCAAACTTGCATGTCTAGAAAAGAAAACCGCGTCTTTGTGAACTGCAAGTCTACCATTAAGCTAAGCGCATAAGCGCATATGTATTTCAAGCCGCATTTTCAAGCCGCATCGTCTAATCAAAAAAATCCGTAGCTACTTGGCAATGAAAATCCAATCGATCGCACGTAAATCTAGTGCCACGGCGTTTGTGAACCTA

Full Affymetrix probeset data:

Annotations for 1639028_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720