FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639040_s_at:

>probe:Drosophila_2:1639040_s_at:76:611; Interrogation_Position=3834; Antisense; TGACCAATCCGGCTGGCAGTAGTTT
>probe:Drosophila_2:1639040_s_at:354:567; Interrogation_Position=3848; Antisense; GGCAGTAGTTTCAACGCGGATCCTT
>probe:Drosophila_2:1639040_s_at:132:349; Interrogation_Position=3888; Antisense; GCAGTCCCGAGTCCATAGAGATCGA
>probe:Drosophila_2:1639040_s_at:681:677; Interrogation_Position=3903; Antisense; TAGAGATCGACCAGCGACCCGTTGG
>probe:Drosophila_2:1639040_s_at:107:201; Interrogation_Position=3936; Antisense; AACGCTCGCAATCGTTGGGCAGGAA
>probe:Drosophila_2:1639040_s_at:718:177; Interrogation_Position=3959; Antisense; AAACTGCATCGTTCGGGTGCTTCGA
>probe:Drosophila_2:1639040_s_at:583:715; Interrogation_Position=3979; Antisense; TTCGACACTGGAGAGGCGGCCCTAT
>probe:Drosophila_2:1639040_s_at:154:443; Interrogation_Position=4013; Antisense; GATGTGGTGACCATACTGCGCTCCT
>probe:Drosophila_2:1639040_s_at:202:331; Interrogation_Position=4065; Antisense; GCGGAAATTTGGTCACTGCCAGCAC
>probe:Drosophila_2:1639040_s_at:540:133; Interrogation_Position=4134; Antisense; ACGCCTCATTCCGATCCATAGAGAA
>probe:Drosophila_2:1639040_s_at:52:239; Interrogation_Position=4157; Antisense; AATCTTGTGCTGAATGCCGAGCCAC
>probe:Drosophila_2:1639040_s_at:179:433; Interrogation_Position=4238; Antisense; GAGTGCGCGCGAAATAATACATCTG
>probe:Drosophila_2:1639040_s_at:657:675; Interrogation_Position=4293; Antisense; TAGCGTAACTCTTATGCGATCCACA
>probe:Drosophila_2:1639040_s_at:675:683; Interrogation_Position=4318; Antisense; TATCCGCTTGCTTTCTTAGACTTGA

Paste this into a BLAST search page for me
TGACCAATCCGGCTGGCAGTAGTTTGGCAGTAGTTTCAACGCGGATCCTTGCAGTCCCGAGTCCATAGAGATCGATAGAGATCGACCAGCGACCCGTTGGAACGCTCGCAATCGTTGGGCAGGAAAAACTGCATCGTTCGGGTGCTTCGATTCGACACTGGAGAGGCGGCCCTATGATGTGGTGACCATACTGCGCTCCTGCGGAAATTTGGTCACTGCCAGCACACGCCTCATTCCGATCCATAGAGAAAATCTTGTGCTGAATGCCGAGCCACGAGTGCGCGCGAAATAATACATCTGTAGCGTAACTCTTATGCGATCCACATATCCGCTTGCTTTCTTAGACTTGA

Full Affymetrix probeset data:

Annotations for 1639040_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720