FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639118_a_at:

>probe:Drosophila_2:1639118_a_at:649:449; Interrogation_Position=1701; Antisense; GATCGATTTATGTTTAGGGTCCTAA
>probe:Drosophila_2:1639118_a_at:450:247; Interrogation_Position=1813; Antisense; AATTGACTACCAACTGAGCGGCGAC
>probe:Drosophila_2:1639118_a_at:723:415; Interrogation_Position=1828; Antisense; GAGCGGCGACGGATTCTCCTTGAGA
>probe:Drosophila_2:1639118_a_at:494:11; Interrogation_Position=1840; Antisense; ATTCTCCTTGAGATTCAGTCGTTGT
>probe:Drosophila_2:1639118_a_at:680:3; Interrogation_Position=1913; Antisense; ATTGTTTTTAGCGATCCAGCGAAAT
>probe:Drosophila_2:1639118_a_at:432:379; Interrogation_Position=1990; Antisense; GAACCTTTATGATTTGTGGCAAGTA
>probe:Drosophila_2:1639118_a_at:129:521; Interrogation_Position=2005; Antisense; GTGGCAAGTAAGATCCCAACTCCTG
>probe:Drosophila_2:1639118_a_at:112:451; Interrogation_Position=2016; Antisense; GATCCCAACTCCTGAAATGCGAATG
>probe:Drosophila_2:1639118_a_at:94:325; Interrogation_Position=2034; Antisense; GCGAATGCCACGCACATTTGTGTAC
>probe:Drosophila_2:1639118_a_at:595:729; Interrogation_Position=2051; Antisense; TTGTGTACAGGCTGCACAGTGGCCG
>probe:Drosophila_2:1639118_a_at:528:83; Interrogation_Position=2068; Antisense; AGTGGCCGAGAAATGGTGTCCTAGC
>probe:Drosophila_2:1639118_a_at:612:515; Interrogation_Position=2083; Antisense; GTGTCCTAGCGAGCAAAATCCATAT
>probe:Drosophila_2:1639118_a_at:395:25; Interrogation_Position=2112; Antisense; ATACCAACTCTGTTAGTCCCTAAGA
>probe:Drosophila_2:1639118_a_at:110:487; Interrogation_Position=2138; Antisense; GTAGATGCTACGTTAAGCCAGACTA

Paste this into a BLAST search page for me
GATCGATTTATGTTTAGGGTCCTAAAATTGACTACCAACTGAGCGGCGACGAGCGGCGACGGATTCTCCTTGAGAATTCTCCTTGAGATTCAGTCGTTGTATTGTTTTTAGCGATCCAGCGAAATGAACCTTTATGATTTGTGGCAAGTAGTGGCAAGTAAGATCCCAACTCCTGGATCCCAACTCCTGAAATGCGAATGGCGAATGCCACGCACATTTGTGTACTTGTGTACAGGCTGCACAGTGGCCGAGTGGCCGAGAAATGGTGTCCTAGCGTGTCCTAGCGAGCAAAATCCATATATACCAACTCTGTTAGTCCCTAAGAGTAGATGCTACGTTAAGCCAGACTA

Full Affymetrix probeset data:

Annotations for 1639118_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720