FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639130_a_at:

>probe:Drosophila_2:1639130_a_at:411:321; Interrogation_Position=4998; Antisense; GCCCATCCTAGACGTAGAGCTAAGT
>probe:Drosophila_2:1639130_a_at:417:73; Interrogation_Position=5092; Antisense; AGGACACTCTGGCTCAGAAGGATCA
>probe:Drosophila_2:1639130_a_at:276:449; Interrogation_Position=5112; Antisense; GATCAGGTCGTTCATAAGGCTTCAT
>probe:Drosophila_2:1639130_a_at:159:225; Interrogation_Position=5127; Antisense; AAGGCTTCATGGCAACAGAACGAAC
>probe:Drosophila_2:1639130_a_at:501:683; Interrogation_Position=5154; Antisense; TATGCTTAGCTAATCACACTGCCAG
>probe:Drosophila_2:1639130_a_at:274:145; Interrogation_Position=5171; Antisense; ACTGCCAGTGTCGATGTGTGCCAAT
>probe:Drosophila_2:1639130_a_at:195:33; Interrogation_Position=5194; Antisense; ATAATTGGGTGGCTGATCGCCCACT
>probe:Drosophila_2:1639130_a_at:475:519; Interrogation_Position=5219; Antisense; GTGGCAGCAACATTCATGCGATGTA
>probe:Drosophila_2:1639130_a_at:16:477; Interrogation_Position=5263; Antisense; GTTATCTTTAAGTCAATACCCGCGT
>probe:Drosophila_2:1639130_a_at:614:27; Interrogation_Position=5278; Antisense; ATACCCGCGTGGATCATCCGAAACA
>probe:Drosophila_2:1639130_a_at:190:389; Interrogation_Position=5297; Antisense; GAAACACGCGGCCAGTGCATGCTGA
>probe:Drosophila_2:1639130_a_at:676:29; Interrogation_Position=5328; Antisense; ATACTCAACGTGGAGCTGAACCGCA
>probe:Drosophila_2:1639130_a_at:623:333; Interrogation_Position=5342; Antisense; GCTGAACCGCAGTGGCCTATTTGTA
>probe:Drosophila_2:1639130_a_at:388:579; Interrogation_Position=5355; Antisense; GGCCTATTTGTACACTCGACGACAT

Paste this into a BLAST search page for me
GCCCATCCTAGACGTAGAGCTAAGTAGGACACTCTGGCTCAGAAGGATCAGATCAGGTCGTTCATAAGGCTTCATAAGGCTTCATGGCAACAGAACGAACTATGCTTAGCTAATCACACTGCCAGACTGCCAGTGTCGATGTGTGCCAATATAATTGGGTGGCTGATCGCCCACTGTGGCAGCAACATTCATGCGATGTAGTTATCTTTAAGTCAATACCCGCGTATACCCGCGTGGATCATCCGAAACAGAAACACGCGGCCAGTGCATGCTGAATACTCAACGTGGAGCTGAACCGCAGCTGAACCGCAGTGGCCTATTTGTAGGCCTATTTGTACACTCGACGACAT

Full Affymetrix probeset data:

Annotations for 1639130_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720