FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639144_a_at:

>probe:Drosophila_2:1639144_a_at:622:457; Interrogation_Position=1720; Antisense; GATATCATCGCGGATGCCTGCAAGC
>probe:Drosophila_2:1639144_a_at:342:207; Interrogation_Position=1741; Antisense; AAGCGGTGCTGTCGCATGAGCATCA
>probe:Drosophila_2:1639144_a_at:187:251; Interrogation_Position=1764; Antisense; CAATGAGACTTGCTTCCCCGTAGAG
>probe:Drosophila_2:1639144_a_at:626:123; Interrogation_Position=1877; Antisense; AGCGCTTCTGGGACATCATCGAGGA
>probe:Drosophila_2:1639144_a_at:370:521; Interrogation_Position=1909; Antisense; GTGGCCAAGACCTTGAGGTTTCTCA
>probe:Drosophila_2:1639144_a_at:640:5; Interrogation_Position=1942; Antisense; ATTGTCATGGCCGTTGTCCTCGTCA
>probe:Drosophila_2:1639144_a_at:129:495; Interrogation_Position=1963; Antisense; GTCACTGCAGTCTTTTGGATTCCCA
>probe:Drosophila_2:1639144_a_at:240:589; Interrogation_Position=1978; Antisense; TGGATTCCCATCAGTTGCGTCATAT
>probe:Drosophila_2:1639144_a_at:19:497; Interrogation_Position=1996; Antisense; GTCATATCTTACTTCGACCGCAAGA
>probe:Drosophila_2:1639144_a_at:541:413; Interrogation_Position=2065; Antisense; GACCTTATACATCCCAGTGACGAGA
>probe:Drosophila_2:1639144_a_at:507:295; Interrogation_Position=2085; Antisense; CGAGAGGCGTCGAGTGATTCACATA
>probe:Drosophila_2:1639144_a_at:30:433; Interrogation_Position=2111; Antisense; GAGTGCCACGCCAGAAGATTTCGGT
>probe:Drosophila_2:1639144_a_at:532:577; Interrogation_Position=2136; Antisense; GGCCCGAGCCTGTAATTAGCACAAA
>probe:Drosophila_2:1639144_a_at:223:655; Interrogation_Position=2184; Antisense; TAATCTTCCGTGAGCATTCTTCTTA

Paste this into a BLAST search page for me
GATATCATCGCGGATGCCTGCAAGCAAGCGGTGCTGTCGCATGAGCATCACAATGAGACTTGCTTCCCCGTAGAGAGCGCTTCTGGGACATCATCGAGGAGTGGCCAAGACCTTGAGGTTTCTCAATTGTCATGGCCGTTGTCCTCGTCAGTCACTGCAGTCTTTTGGATTCCCATGGATTCCCATCAGTTGCGTCATATGTCATATCTTACTTCGACCGCAAGAGACCTTATACATCCCAGTGACGAGACGAGAGGCGTCGAGTGATTCACATAGAGTGCCACGCCAGAAGATTTCGGTGGCCCGAGCCTGTAATTAGCACAAATAATCTTCCGTGAGCATTCTTCTTA

Full Affymetrix probeset data:

Annotations for 1639144_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720