FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639183_a_at:

>probe:Drosophila_2:1639183_a_at:270:111; Interrogation_Position=2860; Antisense; AGCACTCCCAAGAAGACTGTCCTGT
>probe:Drosophila_2:1639183_a_at:643:103; Interrogation_Position=2873; Antisense; AGACTGTCCTGTTCGCCGGCAAGGA
>probe:Drosophila_2:1639183_a_at:708:503; Interrogation_Position=2909; Antisense; GTCCGCCACAGAAGCAGGTGCTCAA
>probe:Drosophila_2:1639183_a_at:19:209; Interrogation_Position=2920; Antisense; AAGCAGGTGCTCAAGGCGCGCAACA
>probe:Drosophila_2:1639183_a_at:575:227; Interrogation_Position=2932; Antisense; AAGGCGCGCAACATCTAGGCTATTC
>probe:Drosophila_2:1639183_a_at:439:673; Interrogation_Position=2947; Antisense; TAGGCTATTCCTTTGTAACAACTAC
>probe:Drosophila_2:1639183_a_at:456:491; Interrogation_Position=2961; Antisense; GTAACAACTACTCTATCGTACTATT
>probe:Drosophila_2:1639183_a_at:692:663; Interrogation_Position=2996; Antisense; TACCTTAGCTAAGATCCGATTCGAA
>probe:Drosophila_2:1639183_a_at:473:293; Interrogation_Position=3035; Antisense; CGTTGCACACAACACAGCCAGAGGT
>probe:Drosophila_2:1639183_a_at:30:643; Interrogation_Position=3063; Antisense; TCTGAAATCTCTTTCGAGCACTCTC
>probe:Drosophila_2:1639183_a_at:561:111; Interrogation_Position=3079; Antisense; AGCACTCTCCGACTAAATTCCAAAT
>probe:Drosophila_2:1639183_a_at:478:5; Interrogation_Position=3107; Antisense; ATTGTTTTCTATCTTTCGCGTTTGT
>probe:Drosophila_2:1639183_a_at:668:387; Interrogation_Position=3138; Antisense; GAAATATGGGACTTACCTAATCTCA
>probe:Drosophila_2:1639183_a_at:186:513; Interrogation_Position=3241; Antisense; GTGAGACCTTCTTTAAAGCTATTTA

Paste this into a BLAST search page for me
AGCACTCCCAAGAAGACTGTCCTGTAGACTGTCCTGTTCGCCGGCAAGGAGTCCGCCACAGAAGCAGGTGCTCAAAAGCAGGTGCTCAAGGCGCGCAACAAAGGCGCGCAACATCTAGGCTATTCTAGGCTATTCCTTTGTAACAACTACGTAACAACTACTCTATCGTACTATTTACCTTAGCTAAGATCCGATTCGAACGTTGCACACAACACAGCCAGAGGTTCTGAAATCTCTTTCGAGCACTCTCAGCACTCTCCGACTAAATTCCAAATATTGTTTTCTATCTTTCGCGTTTGTGAAATATGGGACTTACCTAATCTCAGTGAGACCTTCTTTAAAGCTATTTA

Full Affymetrix probeset data:

Annotations for 1639183_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720