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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639195_a_at:

>probe:Drosophila_2:1639195_a_at:40:99; Interrogation_Position=1876; Antisense; AGATGAGCAAGGACGACTTCGATCA
>probe:Drosophila_2:1639195_a_at:663:149; Interrogation_Position=1891; Antisense; ACTTCGATCAGCTCTGTGAGGCTTA
>probe:Drosophila_2:1639195_a_at:283:77; Interrogation_Position=1933; Antisense; AGGATGAGCACCAGCAGCCGGATAT
>probe:Drosophila_2:1639195_a_at:363:477; Interrogation_Position=1991; Antisense; GTTTTAAGTGTTTTGAGCCGCTGTC
>probe:Drosophila_2:1639195_a_at:698:415; Interrogation_Position=2005; Antisense; GAGCCGCTGTCATGGCCAAATTGTA
>probe:Drosophila_2:1639195_a_at:457:33; Interrogation_Position=2089; Antisense; ATCAATTGCAGTTCGGTCGCAGTCA
>probe:Drosophila_2:1639195_a_at:619:501; Interrogation_Position=2104; Antisense; GTCGCAGTCAGCCAGTCGTATAAAA
>probe:Drosophila_2:1639195_a_at:176:173; Interrogation_Position=2126; Antisense; AAAGCTTCGCATTGGTTGGCCGATT
>probe:Drosophila_2:1639195_a_at:277:463; Interrogation_Position=2147; Antisense; GATTGACAAGCTCCCGTTGCAAGTG
>probe:Drosophila_2:1639195_a_at:286:191; Interrogation_Position=2231; Antisense; AACATTCGCGTCTGTCCACGGTGAG
>probe:Drosophila_2:1639195_a_at:678:309; Interrogation_Position=2246; Antisense; CCACGGTGAGAGCTTGTCATGCCAA
>probe:Drosophila_2:1639195_a_at:297:551; Interrogation_Position=2274; Antisense; GGAGCAGTAAGAACTTCGGCAGTCT
>probe:Drosophila_2:1639195_a_at:649:379; Interrogation_Position=2333; Antisense; GAAGCCACCGGACACAACATATTAG
>probe:Drosophila_2:1639195_a_at:149:87; Interrogation_Position=2356; Antisense; AGTGCTGCTTATGCTAACGATATTT

Paste this into a BLAST search page for me
AGATGAGCAAGGACGACTTCGATCAACTTCGATCAGCTCTGTGAGGCTTAAGGATGAGCACCAGCAGCCGGATATGTTTTAAGTGTTTTGAGCCGCTGTCGAGCCGCTGTCATGGCCAAATTGTAATCAATTGCAGTTCGGTCGCAGTCAGTCGCAGTCAGCCAGTCGTATAAAAAAAGCTTCGCATTGGTTGGCCGATTGATTGACAAGCTCCCGTTGCAAGTGAACATTCGCGTCTGTCCACGGTGAGCCACGGTGAGAGCTTGTCATGCCAAGGAGCAGTAAGAACTTCGGCAGTCTGAAGCCACCGGACACAACATATTAGAGTGCTGCTTATGCTAACGATATTT

Full Affymetrix probeset data:

Annotations for 1639195_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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