FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639202_a_at:

>probe:Drosophila_2:1639202_a_at:211:103; Interrogation_Position=1452; Antisense; AGACCCTGTGCTCGGACAACAAGTT
>probe:Drosophila_2:1639202_a_at:483:171; Interrogation_Position=1528; Antisense; AAAGAAGTTGCCCATGATCCTGGCC
>probe:Drosophila_2:1639202_a_at:249:653; Interrogation_Position=1588; Antisense; TAATAGGCACATCAAGGTCTCGCAT
>probe:Drosophila_2:1639202_a_at:683:693; Interrogation_Position=1622; Antisense; TTTCCACTGGAACTGAGGCTCTTTA
>probe:Drosophila_2:1639202_a_at:313:645; Interrogation_Position=1641; Antisense; TCTTTAACACCTCCGATGATGCAGT
>probe:Drosophila_2:1639202_a_at:134:267; Interrogation_Position=1662; Antisense; CAGTGAATCCTGATCGTCTCTACGA
>probe:Drosophila_2:1639202_a_at:433:135; Interrogation_Position=1683; Antisense; ACGATCTGACCGCTGTGGTTATCCA
>probe:Drosophila_2:1639202_a_at:206:471; Interrogation_Position=1713; Antisense; GTTCCGGACCAAATCGTGGCCATTA
>probe:Drosophila_2:1639202_a_at:107:289; Interrogation_Position=1759; Antisense; CGGACTGTGGCTACTATTCGACGAT
>probe:Drosophila_2:1639202_a_at:127:439; Interrogation_Position=1802; Antisense; GAGGCTTCCACAATCGAGGACTTCT
>probe:Drosophila_2:1639202_a_at:223:75; Interrogation_Position=1818; Antisense; AGGACTTCTATGGTCTGACCTCGGA
>probe:Drosophila_2:1639202_a_at:541:551; Interrogation_Position=1858; Antisense; GGAGACCGGCTACATACTGTTCTAT
>probe:Drosophila_2:1639202_a_at:585:653; Interrogation_Position=1901; Antisense; TAATCCTACTACGTTATCGCCCATT
>probe:Drosophila_2:1639202_a_at:385:393; Interrogation_Position=1938; Antisense; GAAAGTTTTCAATCTCCTGTGCAAG

Paste this into a BLAST search page for me
AGACCCTGTGCTCGGACAACAAGTTAAAGAAGTTGCCCATGATCCTGGCCTAATAGGCACATCAAGGTCTCGCATTTTCCACTGGAACTGAGGCTCTTTATCTTTAACACCTCCGATGATGCAGTCAGTGAATCCTGATCGTCTCTACGAACGATCTGACCGCTGTGGTTATCCAGTTCCGGACCAAATCGTGGCCATTACGGACTGTGGCTACTATTCGACGATGAGGCTTCCACAATCGAGGACTTCTAGGACTTCTATGGTCTGACCTCGGAGGAGACCGGCTACATACTGTTCTATTAATCCTACTACGTTATCGCCCATTGAAAGTTTTCAATCTCCTGTGCAAG

Full Affymetrix probeset data:

Annotations for 1639202_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720