FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639212_a_at:

>probe:Drosophila_2:1639212_a_at:606:315; Interrogation_Position=1748; Antisense; GCCTCTGCCAACGTGGATGATCTAT
>probe:Drosophila_2:1639212_a_at:463:443; Interrogation_Position=1763; Antisense; GATGATCTATCTCTGCTTGTGAAGC
>probe:Drosophila_2:1639212_a_at:506:377; Interrogation_Position=1783; Antisense; GAAGCTGTATCAGATGGGTTACTTT
>probe:Drosophila_2:1639212_a_at:598:527; Interrogation_Position=1798; Antisense; GGGTTACTTTAAGAGCGAGCATCAT
>probe:Drosophila_2:1639212_a_at:48:61; Interrogation_Position=1835; Antisense; ATGTACTTCGAGAACCTGCGACGTT
>probe:Drosophila_2:1639212_a_at:594:325; Interrogation_Position=1852; Antisense; GCGACGTTCGCAACTGCTGCAATTG
>probe:Drosophila_2:1639212_a_at:3:269; Interrogation_Position=1888; Antisense; CAGGGATGTGCTTATCATTTACGAA
>probe:Drosophila_2:1639212_a_at:555:391; Interrogation_Position=1910; Antisense; GAAACCGAAGATCCTGCAATTGCAT
>probe:Drosophila_2:1639212_a_at:5:481; Interrogation_Position=1956; Antisense; GTTTGGGACGAATTTGCATTCCTAG
>probe:Drosophila_2:1639212_a_at:533:31; Interrogation_Position=2067; Antisense; ATCAATTTACGCTTGTAGACTACAT
>probe:Drosophila_2:1639212_a_at:318:255; Interrogation_Position=2144; Antisense; CAAACTATGTTTTTCCGTGATTTCA
>probe:Drosophila_2:1639212_a_at:226:475; Interrogation_Position=2204; Antisense; GTTACATTTTAAGCTTCGCGCCCAT
>probe:Drosophila_2:1639212_a_at:456:633; Interrogation_Position=2219; Antisense; TCGCGCCCATTGTACAGCTTTAAGG
>probe:Drosophila_2:1639212_a_at:328:365; Interrogation_Position=2260; Antisense; GAATATTCTGATGCTCTAAGAGCCA

Paste this into a BLAST search page for me
GCCTCTGCCAACGTGGATGATCTATGATGATCTATCTCTGCTTGTGAAGCGAAGCTGTATCAGATGGGTTACTTTGGGTTACTTTAAGAGCGAGCATCATATGTACTTCGAGAACCTGCGACGTTGCGACGTTCGCAACTGCTGCAATTGCAGGGATGTGCTTATCATTTACGAAGAAACCGAAGATCCTGCAATTGCATGTTTGGGACGAATTTGCATTCCTAGATCAATTTACGCTTGTAGACTACATCAAACTATGTTTTTCCGTGATTTCAGTTACATTTTAAGCTTCGCGCCCATTCGCGCCCATTGTACAGCTTTAAGGGAATATTCTGATGCTCTAAGAGCCA

Full Affymetrix probeset data:

Annotations for 1639212_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720