FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639217_s_at:

>probe:Drosophila_2:1639217_s_at:549:461; Interrogation_Position=4793; Antisense; GATTATACCACTTATTGATTACTGA
>probe:Drosophila_2:1639217_s_at:376:683; Interrogation_Position=4846; Antisense; TATCCTCTAAGACATGTTTGCTACT
>probe:Drosophila_2:1639217_s_at:297:401; Interrogation_Position=4856; Antisense; GACATGTTTGCTACTTTTATACGAA
>probe:Drosophila_2:1639217_s_at:409:301; Interrogation_Position=4898; Antisense; CCGAACCGCGACACAAACAACAATT
>probe:Drosophila_2:1639217_s_at:305:13; Interrogation_Position=4920; Antisense; ATTCACAATTTTTATACTCGCTTAG
>probe:Drosophila_2:1639217_s_at:143:145; Interrogation_Position=4935; Antisense; ACTCGCTTAGAATTTATGTTTTCCA
>probe:Drosophila_2:1639217_s_at:161:477; Interrogation_Position=4962; Antisense; GTTTTATTGTAACCACGACAGCGGA
>probe:Drosophila_2:1639217_s_at:409:439; Interrogation_Position=4994; Antisense; GATGGAATTACCTACCTACACCGTA
>probe:Drosophila_2:1639217_s_at:13:617; Interrogation_Position=5026; Antisense; TGCAGACAAAAACCCACTGGCGATT
>probe:Drosophila_2:1639217_s_at:501:301; Interrogation_Position=5038; Antisense; CCCACTGGCGATTCTTTAATTTAAT
>probe:Drosophila_2:1639217_s_at:437:181; Interrogation_Position=5069; Antisense; AAAAACAACTGAACGCACTGAGAAT
>probe:Drosophila_2:1639217_s_at:686:661; Interrogation_Position=5150; Antisense; TAAAATAATTTCTTCGTTCGCAAGG
>probe:Drosophila_2:1639217_s_at:339:309; Interrogation_Position=5174; Antisense; GAAGACGGACGAATTTGTTGTTTTG
>probe:Drosophila_2:1639217_s_at:348:477; Interrogation_Position=5193; Antisense; GTTTTGCCCCAAAATATATTACTAT

Paste this into a BLAST search page for me
GATTATACCACTTATTGATTACTGATATCCTCTAAGACATGTTTGCTACTGACATGTTTGCTACTTTTATACGAACCGAACCGCGACACAAACAACAATTATTCACAATTTTTATACTCGCTTAGACTCGCTTAGAATTTATGTTTTCCAGTTTTATTGTAACCACGACAGCGGAGATGGAATTACCTACCTACACCGTATGCAGACAAAAACCCACTGGCGATTCCCACTGGCGATTCTTTAATTTAATAAAAACAACTGAACGCACTGAGAATTAAAATAATTTCTTCGTTCGCAAGGGAAGACGGACGAATTTGTTGTTTTGGTTTTGCCCCAAAATATATTACTAT

Full Affymetrix probeset data:

Annotations for 1639217_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720