FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639223_a_at:

>probe:Drosophila_2:1639223_a_at:293:245; Interrogation_Position=5192; Antisense; AATTATAATCCTTTCGCCTTTGCCT
>probe:Drosophila_2:1639223_a_at:66:301; Interrogation_Position=5206; Antisense; CGCCTTTGCCTAGCTAATGTTCATT
>probe:Drosophila_2:1639223_a_at:670:231; Interrogation_Position=5238; Antisense; AATGCTAACACAAACGAAACACACA
>probe:Drosophila_2:1639223_a_at:155:541; Interrogation_Position=5358; Antisense; GGTTTTAACATACAGAATACACGAA
>probe:Drosophila_2:1639223_a_at:476:385; Interrogation_Position=5386; Antisense; GAACACACACAAATCTTAGCATATC
>probe:Drosophila_2:1639223_a_at:678:115; Interrogation_Position=5403; Antisense; AGCATATCAGTTTTTCCTCTAAGCA
>probe:Drosophila_2:1639223_a_at:272:263; Interrogation_Position=5410; Antisense; CAGTTTTTCCTCTAAGCATTATAAA
>probe:Drosophila_2:1639223_a_at:245:289; Interrogation_Position=5470; Antisense; CGGTAAATGGAATTTTCGTGTGCTA
>probe:Drosophila_2:1639223_a_at:384:219; Interrogation_Position=5552; Antisense; AATGAACCCAGTGTACTTCCTTAAT
>probe:Drosophila_2:1639223_a_at:546:267; Interrogation_Position=5560; Antisense; CAGTGTACTTCCTTAATTGATTCGA
>probe:Drosophila_2:1639223_a_at:505:603; Interrogation_Position=5577; Antisense; TGATTCGAAATCAAAACGGCAAATG
>probe:Drosophila_2:1639223_a_at:247:137; Interrogation_Position=5650; Antisense; ACGTTTATGTTCAATCTACTGTAGA
>probe:Drosophila_2:1639223_a_at:436:395; Interrogation_Position=5678; Antisense; GAAATTTCTTCTTAGTTCGTAATGG
>probe:Drosophila_2:1639223_a_at:627:675; Interrogation_Position=5735; Antisense; TAGTTTACTTTACCTTGCAAAATAT

Paste this into a BLAST search page for me
AATTATAATCCTTTCGCCTTTGCCTCGCCTTTGCCTAGCTAATGTTCATTAATGCTAACACAAACGAAACACACAGGTTTTAACATACAGAATACACGAAGAACACACACAAATCTTAGCATATCAGCATATCAGTTTTTCCTCTAAGCACAGTTTTTCCTCTAAGCATTATAAACGGTAAATGGAATTTTCGTGTGCTAAATGAACCCAGTGTACTTCCTTAATCAGTGTACTTCCTTAATTGATTCGATGATTCGAAATCAAAACGGCAAATGACGTTTATGTTCAATCTACTGTAGAGAAATTTCTTCTTAGTTCGTAATGGTAGTTTACTTTACCTTGCAAAATAT

Full Affymetrix probeset data:

Annotations for 1639223_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720