FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639242_a_at:

>probe:Drosophila_2:1639242_a_at:368:175; Interrogation_Position=2552; Antisense; AAACCCTTCGACTATAGCAAACTGG
>probe:Drosophila_2:1639242_a_at:32:197; Interrogation_Position=2571; Antisense; AACTGGACACCTACGATATCCTAAA
>probe:Drosophila_2:1639242_a_at:475:305; Interrogation_Position=2590; Antisense; CCTAAACAGGGCCAGGTACCATGTG
>probe:Drosophila_2:1639242_a_at:36:539; Interrogation_Position=2604; Antisense; GGTACCATGTGGATCGCAGCGACTT
>probe:Drosophila_2:1639242_a_at:414:123; Interrogation_Position=2621; Antisense; AGCGACTTTCTGCAGGCGCTCAAGT
>probe:Drosophila_2:1639242_a_at:97:253; Interrogation_Position=2641; Antisense; CAAGTACATGAATCTGCTGCAGGGT
>probe:Drosophila_2:1639242_a_at:464:335; Interrogation_Position=2656; Antisense; GCTGCAGGGTGCATCGCGCAAGATT
>probe:Drosophila_2:1639242_a_at:78:445; Interrogation_Position=2692; Antisense; GATGAAGGAGGCTCGCCTCATGCTG
>probe:Drosophila_2:1639242_a_at:249:71; Interrogation_Position=2727; Antisense; AGGCGGCCAACACCTTGATGGCTCA
>probe:Drosophila_2:1639242_a_at:112:337; Interrogation_Position=2756; Antisense; GCTGCCAGCGGACTATTGTATTTGT
>probe:Drosophila_2:1639242_a_at:605:481; Interrogation_Position=2773; Antisense; GTATTTGTAGACTACGTCCCGTGTC
>probe:Drosophila_2:1639242_a_at:357:495; Interrogation_Position=2795; Antisense; GTCCCCTTCCTTCAGAAACAAGATG
>probe:Drosophila_2:1639242_a_at:129:691; Interrogation_Position=2880; Antisense; TTTGTCCAATTAGCGATCACAGTTG
>probe:Drosophila_2:1639242_a_at:240:249; Interrogation_Position=3076; Antisense; AATTGGCAAGCTTTGTGTTTCTGAA

Paste this into a BLAST search page for me
AAACCCTTCGACTATAGCAAACTGGAACTGGACACCTACGATATCCTAAACCTAAACAGGGCCAGGTACCATGTGGGTACCATGTGGATCGCAGCGACTTAGCGACTTTCTGCAGGCGCTCAAGTCAAGTACATGAATCTGCTGCAGGGTGCTGCAGGGTGCATCGCGCAAGATTGATGAAGGAGGCTCGCCTCATGCTGAGGCGGCCAACACCTTGATGGCTCAGCTGCCAGCGGACTATTGTATTTGTGTATTTGTAGACTACGTCCCGTGTCGTCCCCTTCCTTCAGAAACAAGATGTTTGTCCAATTAGCGATCACAGTTGAATTGGCAAGCTTTGTGTTTCTGAA

Full Affymetrix probeset data:

Annotations for 1639242_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720