FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639249_at:

>probe:Drosophila_2:1639249_at:75:157; Interrogation_Position=129; Antisense; ACACGCCTGGGCTCTTGAAGATTGT
>probe:Drosophila_2:1639249_at:576:59; Interrogation_Position=13; Antisense; ATGTTCAATATTATCCTTCTGGCAA
>probe:Drosophila_2:1639249_at:656:215; Interrogation_Position=146; Antisense; AAGATTGTGTGTGCCGGGTCTTCCA
>probe:Drosophila_2:1639249_at:253:383; Interrogation_Position=171; Antisense; GAACGGCTGTCTTCTGAACGAGGAG
>probe:Drosophila_2:1639249_at:131:655; Interrogation_Position=230; Antisense; TAATTCCGGTCACCGAGCAGGTGTG
>probe:Drosophila_2:1639249_at:408:473; Interrogation_Position=261; Antisense; GTTCATCAAGCGCAAGTGCTTCCTT
>probe:Drosophila_2:1639249_at:553:219; Interrogation_Position=274; Antisense; AAGTGCTTCCTTGGATGGCCTGTGC
>probe:Drosophila_2:1639249_at:195:715; Interrogation_Position=29; Antisense; TTCTGGCAACAATCCTAGTGAGCGT
>probe:Drosophila_2:1639249_at:276:463; Interrogation_Position=312; Antisense; GATTCCATCGCCATGCGGATGCAAT
>probe:Drosophila_2:1639249_at:312:353; Interrogation_Position=397; Antisense; GCAGCTGAATGCAACAAACCCTATA
>probe:Drosophila_2:1639249_at:215:255; Interrogation_Position=411; Antisense; CAAACCCTATATCAGCTACTCGAAG
>probe:Drosophila_2:1639249_at:729:571; Interrogation_Position=54; Antisense; GGCTCAGGCCACAATCATCATTAAG
>probe:Drosophila_2:1639249_at:713:641; Interrogation_Position=71; Antisense; TCATTAAGCCCGAAAATCCCGTGGA
>probe:Drosophila_2:1639249_at:209:77; Interrogation_Position=95; Antisense; AGGAGACCACCAAGTGCCAGATCTA

Paste this into a BLAST search page for me
ACACGCCTGGGCTCTTGAAGATTGTATGTTCAATATTATCCTTCTGGCAAAAGATTGTGTGTGCCGGGTCTTCCAGAACGGCTGTCTTCTGAACGAGGAGTAATTCCGGTCACCGAGCAGGTGTGGTTCATCAAGCGCAAGTGCTTCCTTAAGTGCTTCCTTGGATGGCCTGTGCTTCTGGCAACAATCCTAGTGAGCGTGATTCCATCGCCATGCGGATGCAATGCAGCTGAATGCAACAAACCCTATACAAACCCTATATCAGCTACTCGAAGGGCTCAGGCCACAATCATCATTAAGTCATTAAGCCCGAAAATCCCGTGGAAGGAGACCACCAAGTGCCAGATCTA

Full Affymetrix probeset data:

Annotations for 1639249_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720