FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639273_s_at:

>probe:Drosophila_2:1639273_s_at:334:391; Interrogation_Position=2972; Antisense; GAAACGCGTGAAGCACATTCAAAAC
>probe:Drosophila_2:1639273_s_at:188:675; Interrogation_Position=3059; Antisense; TATCCTCCTACCTTAATGTTTGTCG
>probe:Drosophila_2:1639273_s_at:483:277; Interrogation_Position=3066; Antisense; CTACCTTAATGTTTGTCGTTCGCCA
>probe:Drosophila_2:1639273_s_at:688:725; Interrogation_Position=3078; Antisense; TTGTCGTTCGCCATTTATTTATGTT
>probe:Drosophila_2:1639273_s_at:489:689; Interrogation_Position=3093; Antisense; TATTTATGTTTTTTGCCGCTTCGGT
>probe:Drosophila_2:1639273_s_at:438:681; Interrogation_Position=3112; Antisense; TTCGGTCACCCGTGTGGCTCACAGC
>probe:Drosophila_2:1639273_s_at:60:573; Interrogation_Position=3127; Antisense; GGCTCACAGCGCTTCAACTAAATGT
>probe:Drosophila_2:1639273_s_at:169:703; Interrogation_Position=3221; Antisense; TTATTTGTAGACCATCTAGCTGAGT
>probe:Drosophila_2:1639273_s_at:684:277; Interrogation_Position=3236; Antisense; CTAGCTGAGTAGATCGATCGTTTGG
>probe:Drosophila_2:1639273_s_at:624:449; Interrogation_Position=3247; Antisense; GATCGATCGTTTGGTGTCGTAATTC
>probe:Drosophila_2:1639273_s_at:66:501; Interrogation_Position=3262; Antisense; GTCGTAATTCGAGCATTCACTTTTA
>probe:Drosophila_2:1639273_s_at:173:241; Interrogation_Position=3307; Antisense; AATAATCGCAGTGGAGCACACAAGA
>probe:Drosophila_2:1639273_s_at:360:665; Interrogation_Position=3355; Antisense; TACATACAGCCCTATCTATATGCAT
>probe:Drosophila_2:1639273_s_at:547:31; Interrogation_Position=3386; Antisense; ATAACTCGTTTGTGTTGATCAATGA

Paste this into a BLAST search page for me
GAAACGCGTGAAGCACATTCAAAACTATCCTCCTACCTTAATGTTTGTCGCTACCTTAATGTTTGTCGTTCGCCATTGTCGTTCGCCATTTATTTATGTTTATTTATGTTTTTTGCCGCTTCGGTTTCGGTCACCCGTGTGGCTCACAGCGGCTCACAGCGCTTCAACTAAATGTTTATTTGTAGACCATCTAGCTGAGTCTAGCTGAGTAGATCGATCGTTTGGGATCGATCGTTTGGTGTCGTAATTCGTCGTAATTCGAGCATTCACTTTTAAATAATCGCAGTGGAGCACACAAGATACATACAGCCCTATCTATATGCATATAACTCGTTTGTGTTGATCAATGA

Full Affymetrix probeset data:

Annotations for 1639273_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720