FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639320_a_at:

>probe:Drosophila_2:1639320_a_at:637:609; Interrogation_Position=1374; Antisense; TGCGTGGCGGACTCCAGATTTGAAC
>probe:Drosophila_2:1639320_a_at:569:381; Interrogation_Position=1395; Antisense; GAACTGGCCGCCGAGATCAATATGG
>probe:Drosophila_2:1639320_a_at:109:243; Interrogation_Position=1413; Antisense; AATATGGGATTGGTCTGCTTCCGGC
>probe:Drosophila_2:1639320_a_at:711:377; Interrogation_Position=1461; Antisense; GAAGCTCTTCTCAAGCGAATCAATG
>probe:Drosophila_2:1639320_a_at:483:33; Interrogation_Position=1518; Antisense; ATCAAGGATGTCTACTTCCTGCGCA
>probe:Drosophila_2:1639320_a_at:34:625; Interrogation_Position=1537; Antisense; TGCGCATGGCCATTTGCTCGCGATT
>probe:Drosophila_2:1639320_a_at:182:461; Interrogation_Position=1558; Antisense; GATTCACCCAGTCCGAGGACATGGA
>probe:Drosophila_2:1639320_a_at:725:663; Interrogation_Position=1635; Antisense; TAAAGTGGTTGTGCAGGTCTGTTCC
>probe:Drosophila_2:1639320_a_at:678:535; Interrogation_Position=1650; Antisense; GGTCTGTTCCGTGTTTAGTATATAA
>probe:Drosophila_2:1639320_a_at:241:53; Interrogation_Position=1715; Antisense; ATGCATTGTGACTTGGAACCCGGAA
>probe:Drosophila_2:1639320_a_at:634:369; Interrogation_Position=1730; Antisense; GAACCCGGAACAGACCATACACTTT
>probe:Drosophila_2:1639320_a_at:534:29; Interrogation_Position=1746; Antisense; ATACACTTTCCACTTGCGACATGTT
>probe:Drosophila_2:1639320_a_at:114:591; Interrogation_Position=1797; Antisense; TGGTTCGTCCATCGCTACATTATAT
>probe:Drosophila_2:1639320_a_at:227:687; Interrogation_Position=1866; Antisense; TATTGTTAACGTTATGCGCCTAATT

Paste this into a BLAST search page for me
TGCGTGGCGGACTCCAGATTTGAACGAACTGGCCGCCGAGATCAATATGGAATATGGGATTGGTCTGCTTCCGGCGAAGCTCTTCTCAAGCGAATCAATGATCAAGGATGTCTACTTCCTGCGCATGCGCATGGCCATTTGCTCGCGATTGATTCACCCAGTCCGAGGACATGGATAAAGTGGTTGTGCAGGTCTGTTCCGGTCTGTTCCGTGTTTAGTATATAAATGCATTGTGACTTGGAACCCGGAAGAACCCGGAACAGACCATACACTTTATACACTTTCCACTTGCGACATGTTTGGTTCGTCCATCGCTACATTATATTATTGTTAACGTTATGCGCCTAATT

Full Affymetrix probeset data:

Annotations for 1639320_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720