FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639347_s_at:

>probe:Drosophila_2:1639347_s_at:308:31; Interrogation_Position=1010; Antisense; ATAAAATGCTTTCCTACGACCTCCA
>probe:Drosophila_2:1639347_s_at:521:305; Interrogation_Position=1049; Antisense; CCTTGGCCTGTTTGGAGCACGATTA
>probe:Drosophila_2:1639347_s_at:647:419; Interrogation_Position=1063; Antisense; GAGCACGATTACTTTCAGCAGGAAC
>probe:Drosophila_2:1639347_s_at:9:115; Interrogation_Position=1079; Antisense; AGCAGGAACCCCTATAGTCTCGATG
>probe:Drosophila_2:1639347_s_at:726:683; Interrogation_Position=1091; Antisense; TATAGTCTCGATGCCCAGAAGGATA
>probe:Drosophila_2:1639347_s_at:68:83; Interrogation_Position=1174; Antisense; AGTGGACTGATCATTGCGGCCGCGC
>probe:Drosophila_2:1639347_s_at:706:323; Interrogation_Position=1195; Antisense; GCGCTTCGTTCTTGTTACCAATGTT
>probe:Drosophila_2:1639347_s_at:349:601; Interrogation_Position=1243; Antisense; TGTTTATTTTTTCGCGACAGTCCAG
>probe:Drosophila_2:1639347_s_at:582:323; Interrogation_Position=1256; Antisense; GCGACAGTCCAGTTATTGTGTCCGG
>probe:Drosophila_2:1639347_s_at:342:511; Interrogation_Position=1336; Antisense; GTGAATACTACTGCCGATCAACTAT
>probe:Drosophila_2:1639347_s_at:267:371; Interrogation_Position=1401; Antisense; GAAGGCCCTCCAAATCGAAATGTGA
>probe:Drosophila_2:1639347_s_at:598:101; Interrogation_Position=911; Antisense; AGACCATTTCCGTGGCCCTGGAACA
>probe:Drosophila_2:1639347_s_at:195:249; Interrogation_Position=962; Antisense; CAAAAGACTTTTGCCCACACCTGTG
>probe:Drosophila_2:1639347_s_at:602:359; Interrogation_Position=986; Antisense; GCAAGTACGCCGATGATCTGTTGAA

Paste this into a BLAST search page for me
ATAAAATGCTTTCCTACGACCTCCACCTTGGCCTGTTTGGAGCACGATTAGAGCACGATTACTTTCAGCAGGAACAGCAGGAACCCCTATAGTCTCGATGTATAGTCTCGATGCCCAGAAGGATAAGTGGACTGATCATTGCGGCCGCGCGCGCTTCGTTCTTGTTACCAATGTTTGTTTATTTTTTCGCGACAGTCCAGGCGACAGTCCAGTTATTGTGTCCGGGTGAATACTACTGCCGATCAACTATGAAGGCCCTCCAAATCGAAATGTGAAGACCATTTCCGTGGCCCTGGAACACAAAAGACTTTTGCCCACACCTGTGGCAAGTACGCCGATGATCTGTTGAA

Full Affymetrix probeset data:

Annotations for 1639347_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720