FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639349_at:

>probe:Drosophila_2:1639349_at:514:383; Interrogation_Position=1081; Antisense; GAACGGACTACCTTCTGCAATGGAA
>probe:Drosophila_2:1639349_at:16:383; Interrogation_Position=1210; Antisense; GAACGATATCTCTTACTTTACACTG
>probe:Drosophila_2:1639349_at:213:241; Interrogation_Position=1235; Antisense; AATAACCTTCATTCCGCCTATGGTA
>probe:Drosophila_2:1639349_at:619:681; Interrogation_Position=1253; Antisense; TATGGTACACGACCACCATTGCCAG
>probe:Drosophila_2:1639349_at:653:519; Interrogation_Position=1277; Antisense; GTGGCCTTTCAACTTAGCGACGATT
>probe:Drosophila_2:1639349_at:168:463; Interrogation_Position=1298; Antisense; GATTACAACTGCGTCGTGGAGCTGT
>probe:Drosophila_2:1639349_at:547:553; Interrogation_Position=1315; Antisense; GGAGCTGTTTTATCTGTGCACAAAT
>probe:Drosophila_2:1639349_at:76:511; Interrogation_Position=1330; Antisense; GTGCACAAATGCTCTCAGCGAGGAT
>probe:Drosophila_2:1639349_at:724:435; Interrogation_Position=1349; Antisense; GAGGATCGTCCAGCGGCCAAGACCA
>probe:Drosophila_2:1639349_at:486:309; Interrogation_Position=1365; Antisense; CCAAGACCATTTGGCAGTGCCTGGA
>probe:Drosophila_2:1639349_at:380:605; Interrogation_Position=1429; Antisense; TGATAATCATTCTCAGCCTCCGAAC
>probe:Drosophila_2:1639349_at:262:145; Interrogation_Position=1452; Antisense; ACTCCACAATCTTCCTCTTGAATAT
>probe:Drosophila_2:1639349_at:349:673; Interrogation_Position=1521; Antisense; TAGCTATAATTTTTACCCTGTAAGA
>probe:Drosophila_2:1639349_at:60:475; Interrogation_Position=1560; Antisense; GTTAAAGCCCCAAAACGCGAATGCA

Paste this into a BLAST search page for me
GAACGGACTACCTTCTGCAATGGAAGAACGATATCTCTTACTTTACACTGAATAACCTTCATTCCGCCTATGGTATATGGTACACGACCACCATTGCCAGGTGGCCTTTCAACTTAGCGACGATTGATTACAACTGCGTCGTGGAGCTGTGGAGCTGTTTTATCTGTGCACAAATGTGCACAAATGCTCTCAGCGAGGATGAGGATCGTCCAGCGGCCAAGACCACCAAGACCATTTGGCAGTGCCTGGATGATAATCATTCTCAGCCTCCGAACACTCCACAATCTTCCTCTTGAATATTAGCTATAATTTTTACCCTGTAAGAGTTAAAGCCCCAAAACGCGAATGCA

Full Affymetrix probeset data:

Annotations for 1639349_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720