FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639370_at:

>probe:Drosophila_2:1639370_at:203:285; Interrogation_Position=463; Antisense; CTGTCCATCCAGATTGCCAGGAAAT
>probe:Drosophila_2:1639370_at:5:497; Interrogation_Position=553; Antisense; GTCAGTCACCTGAAACGTCACGCAA
>probe:Drosophila_2:1639370_at:523:529; Interrogation_Position=589; Antisense; GGGATACCCCACATACAGTTTGTGC
>probe:Drosophila_2:1639370_at:471:721; Interrogation_Position=608; Antisense; TTGTGCACGGGAACTACGTCCTGGA
>probe:Drosophila_2:1639370_at:166:555; Interrogation_Position=633; Antisense; GGACGACGTCCTGCTCGAAATTGAA
>probe:Drosophila_2:1639370_at:64:643; Interrogation_Position=680; Antisense; TCTGCCTGTCTGTCACTAAGTGGAT
>probe:Drosophila_2:1639370_at:66:85; Interrogation_Position=698; Antisense; AGTGGATCCACCTTAATTTCTGTGA
>probe:Drosophila_2:1639370_at:48:17; Interrogation_Position=713; Antisense; ATTTCTGTGATTCCGGCCTGAAGCA
>probe:Drosophila_2:1639370_at:479:713; Interrogation_Position=742; Antisense; TTCAGACGCATGTACCTGCAGCTGC
>probe:Drosophila_2:1639370_at:589:643; Interrogation_Position=795; Antisense; TCAGTCCTTCGACGGCTACAAGAGG
>probe:Drosophila_2:1639370_at:267:661; Interrogation_Position=864; Antisense; TAAATTCCGACCTGATCATTTCACC
>probe:Drosophila_2:1639370_at:614:17; Interrogation_Position=881; Antisense; ATTTCACCGAATATCTGCTTAGCCC
>probe:Drosophila_2:1639370_at:695:517; Interrogation_Position=910; Antisense; GTGGGCTTTGCCGAAATGAAACTTA
>probe:Drosophila_2:1639370_at:286:277; Interrogation_Position=931; Antisense; CTTATGGGCATACCGGAGCACTGCA

Paste this into a BLAST search page for me
CTGTCCATCCAGATTGCCAGGAAATGTCAGTCACCTGAAACGTCACGCAAGGGATACCCCACATACAGTTTGTGCTTGTGCACGGGAACTACGTCCTGGAGGACGACGTCCTGCTCGAAATTGAATCTGCCTGTCTGTCACTAAGTGGATAGTGGATCCACCTTAATTTCTGTGAATTTCTGTGATTCCGGCCTGAAGCATTCAGACGCATGTACCTGCAGCTGCTCAGTCCTTCGACGGCTACAAGAGGTAAATTCCGACCTGATCATTTCACCATTTCACCGAATATCTGCTTAGCCCGTGGGCTTTGCCGAAATGAAACTTACTTATGGGCATACCGGAGCACTGCA

Full Affymetrix probeset data:

Annotations for 1639370_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720