FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639383_a_at:

>probe:Drosophila_2:1639383_a_at:365:209; Interrogation_Position=1996; Antisense; AAGCATCGAGCCTTGATAGCGCGCG
>probe:Drosophila_2:1639383_a_at:410:183; Interrogation_Position=2102; Antisense; AAAAGCGCAGCCAATTTTCACCCAA
>probe:Drosophila_2:1639383_a_at:333:245; Interrogation_Position=2114; Antisense; AATTTTCACCCAAACGCGGCAGCAG
>probe:Drosophila_2:1639383_a_at:609:343; Interrogation_Position=2138; Antisense; GCATCACCAAAGCTTATCGTCGCAA
>probe:Drosophila_2:1639383_a_at:101:359; Interrogation_Position=2166; Antisense; GCAACGAAATCTTAGCCTGCGGGCT
>probe:Drosophila_2:1639383_a_at:259:623; Interrogation_Position=2183; Antisense; TGCGGGCTCGTCAACAGCGGATGAT
>probe:Drosophila_2:1639383_a_at:696:561; Interrogation_Position=2214; Antisense; GGAAGCCCAGCGTGATGCCAAATTC
>probe:Drosophila_2:1639383_a_at:350:163; Interrogation_Position=2233; Antisense; AAATTCCTGGAGCAACACGCCCAAA
>probe:Drosophila_2:1639383_a_at:9:159; Interrogation_Position=2259; Antisense; ACAACGCCTCGAAGGTGGCAGGAAA
>probe:Drosophila_2:1639383_a_at:403:511; Interrogation_Position=2294; Antisense; GTGAATCGCCAAACTTACTGAGCAA
>probe:Drosophila_2:1639383_a_at:441:371; Interrogation_Position=2401; Antisense; GAAGGCAACCACTGCCAGATGACAA
>probe:Drosophila_2:1639383_a_at:678:549; Interrogation_Position=2436; Antisense; GGAGCTAACACCTGGCAGCAAGGCT
>probe:Drosophila_2:1639383_a_at:116:559; Interrogation_Position=2477; Antisense; GGACAGCCAGAACCATCAACGAAGC
>probe:Drosophila_2:1639383_a_at:218:195; Interrogation_Position=2505; Antisense; AACTGACCAACTTCTTAGCTGGCGA

Paste this into a BLAST search page for me
AAGCATCGAGCCTTGATAGCGCGCGAAAAGCGCAGCCAATTTTCACCCAAAATTTTCACCCAAACGCGGCAGCAGGCATCACCAAAGCTTATCGTCGCAAGCAACGAAATCTTAGCCTGCGGGCTTGCGGGCTCGTCAACAGCGGATGATGGAAGCCCAGCGTGATGCCAAATTCAAATTCCTGGAGCAACACGCCCAAAACAACGCCTCGAAGGTGGCAGGAAAGTGAATCGCCAAACTTACTGAGCAAGAAGGCAACCACTGCCAGATGACAAGGAGCTAACACCTGGCAGCAAGGCTGGACAGCCAGAACCATCAACGAAGCAACTGACCAACTTCTTAGCTGGCGA

Full Affymetrix probeset data:

Annotations for 1639383_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720