FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639403_s_at:

>probe:Drosophila_2:1639403_s_at:158:395; Interrogation_Position=2285; Antisense; GAAATCTTTGGCAACCGCAATCCGT
>probe:Drosophila_2:1639403_s_at:523:235; Interrogation_Position=2303; Antisense; AATCCGTTCTATTCGAGCAGCGGTG
>probe:Drosophila_2:1639403_s_at:196:427; Interrogation_Position=2348; Antisense; GAGATGACGCTTTCGCTGAGGAACA
>probe:Drosophila_2:1639403_s_at:535:155; Interrogation_Position=2370; Antisense; ACAGCGATTACCGACAGGACCAATT
>probe:Drosophila_2:1639403_s_at:471:249; Interrogation_Position=2390; Antisense; CAATTGCCGCCAATGAGCGATGCTT
>probe:Drosophila_2:1639403_s_at:564:621; Interrogation_Position=2424; Antisense; TGCTGCAACAGCTGGTCTACAACAT
>probe:Drosophila_2:1639403_s_at:55:169; Interrogation_Position=2494; Antisense; AAATGTGGTGCAGCTGTTCCTCTGG
>probe:Drosophila_2:1639403_s_at:166:595; Interrogation_Position=2516; Antisense; TGGGCCCCATCCAATTGGCTTAAGG
>probe:Drosophila_2:1639403_s_at:320:189; Interrogation_Position=2555; Antisense; AACAGTCCGGAGATCCTACAGTGGC
>probe:Drosophila_2:1639403_s_at:279:705; Interrogation_Position=2601; Antisense; TTATGTGCGAGGGTCGTCCACAGAT
>probe:Drosophila_2:1639403_s_at:550:263; Interrogation_Position=2650; Antisense; CAGCTGTGGCAATAGGCGCGCCTAT
>probe:Drosophila_2:1639403_s_at:416:315; Interrogation_Position=2669; Antisense; GCCTATGTGGAGTACCTGCTCATAT
>probe:Drosophila_2:1639403_s_at:53:621; Interrogation_Position=2685; Antisense; TGCTCATATGCAGCTTTCTGGCACG
>probe:Drosophila_2:1639403_s_at:261:175; Interrogation_Position=2772; Antisense; AAAGCCTTCTACTTGTTACTCTGAG

Paste this into a BLAST search page for me
GAAATCTTTGGCAACCGCAATCCGTAATCCGTTCTATTCGAGCAGCGGTGGAGATGACGCTTTCGCTGAGGAACAACAGCGATTACCGACAGGACCAATTCAATTGCCGCCAATGAGCGATGCTTTGCTGCAACAGCTGGTCTACAACATAAATGTGGTGCAGCTGTTCCTCTGGTGGGCCCCATCCAATTGGCTTAAGGAACAGTCCGGAGATCCTACAGTGGCTTATGTGCGAGGGTCGTCCACAGATCAGCTGTGGCAATAGGCGCGCCTATGCCTATGTGGAGTACCTGCTCATATTGCTCATATGCAGCTTTCTGGCACGAAAGCCTTCTACTTGTTACTCTGAG

Full Affymetrix probeset data:

Annotations for 1639403_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720