FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1639408_a_at:

>probe:Drosophila_2:1639408_a_at:480:669; Interrogation_Position=2142; Antisense; TACGCTTACAGCGACATCACTCATA
>probe:Drosophila_2:1639408_a_at:246:401; Interrogation_Position=2154; Antisense; GACATCACTCATACGCCCCGTAGAA
>probe:Drosophila_2:1639408_a_at:288:293; Interrogation_Position=2172; Antisense; CGTAGAACACATCGCACTTTGCTTG
>probe:Drosophila_2:1639408_a_at:71:357; Interrogation_Position=2185; Antisense; GCACTTTGCTTGTCATGCAGCGTTA
>probe:Drosophila_2:1639408_a_at:108:497; Interrogation_Position=2196; Antisense; GTCATGCAGCGTTAACTAAACCAAA
>probe:Drosophila_2:1639408_a_at:539:185; Interrogation_Position=2225; Antisense; AACAAAGTCGAGACGACGCCCGCGG
>probe:Drosophila_2:1639408_a_at:449:411; Interrogation_Position=2239; Antisense; GACGCCCGCGGAAAATTGCATTTCT
>probe:Drosophila_2:1639408_a_at:539:345; Interrogation_Position=2256; Antisense; GCATTTCTGTATTAACCCCAAGAGT
>probe:Drosophila_2:1639408_a_at:80:293; Interrogation_Position=2297; Antisense; CGAAAATCAGCATCACTTTCACCGA
>probe:Drosophila_2:1639408_a_at:598:373; Interrogation_Position=2330; Antisense; GAAGTACCATACAAACGAGATGCTA
>probe:Drosophila_2:1639408_a_at:619:203; Interrogation_Position=2382; Antisense; AAGCCTCCCCGCTTTGAAAATGCAG
>probe:Drosophila_2:1639408_a_at:91:37; Interrogation_Position=2509; Antisense; ATCTTGAAGTGTTCATGTATTCGAA
>probe:Drosophila_2:1639408_a_at:470:189; Interrogation_Position=2642; Antisense; AACTCTAAGCATTTGTATTACCCGC
>probe:Drosophila_2:1639408_a_at:520:203; Interrogation_Position=2648; Antisense; AAGCATTTGTATTACCCGCTAAACA

Paste this into a BLAST search page for me
TACGCTTACAGCGACATCACTCATAGACATCACTCATACGCCCCGTAGAACGTAGAACACATCGCACTTTGCTTGGCACTTTGCTTGTCATGCAGCGTTAGTCATGCAGCGTTAACTAAACCAAAAACAAAGTCGAGACGACGCCCGCGGGACGCCCGCGGAAAATTGCATTTCTGCATTTCTGTATTAACCCCAAGAGTCGAAAATCAGCATCACTTTCACCGAGAAGTACCATACAAACGAGATGCTAAAGCCTCCCCGCTTTGAAAATGCAGATCTTGAAGTGTTCATGTATTCGAAAACTCTAAGCATTTGTATTACCCGCAAGCATTTGTATTACCCGCTAAACA

Full Affymetrix probeset data:

Annotations for 1639408_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720